Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0739 AAGAGAAAGTACTTTATATTACTATTATTAGAATGTAGAAACCAAAATGACATAAAAATAAGGAAGAGAAAGAAAGAACAAACAACGCATAAACGCCATTCATTCTTCACAGGCTCTGTTCTGGTCCATAGCACGGATAAAGCAACTAATTCGAAAACTTTGAATACAATGTCTCCATCATTGAAATCAAAATCCATGTCCAAGGCGAAGGCCTCTGCAAGGGCCAGGAAGGAACAACAGAAGTGTTCTCCAAAGACTTCTGTGACTACTAATCATGGGAGTGGCATTCCTACTACCGCATACAATCCCATCTCTGGAACATTCCATACCTTAGAAACATCATTAGTTGCTTCTTCGGCTCCACTTCATCACAACAGCCATTTCCTAAAAATAGATGACACCGATGATAATTCTAGTAGTCTTCAAGGAACGGTGTCTGAGTGTGATTCATTTTCTAACAATGGAAGCTGCTCTGGTGAATCAGAAGACCATAAAGAGAAAGTTGCAAACTCTTCTATGCGTCCGGATACTATACCTGGTTGTGATAATGAGAAAAGGGAGAAGATCCGGCTGAAGAATGAGAGGAAGCACCAACGGCAAAGGGAAAGGAGAGCTCAGGAGTTGCATGAGCGTTGCAGTGGCTATCTAATGTCAAGGAAGCTAGAAGCACTTTCGCAGCAGTTAGTAGCGATGGGGTTCTCTTCTGAGCGAGCAACATTGGCATTGATGTTAAATGATGGCAAATTGGAGGAATCAGTATCCTGGCTCTTCGAAGCAAGTGAAGACAAATCACATACAAAGGGTACTACTACCAATCTTCTAAGTGAAGGTAATTTGAAAATTGACATAAGTGAAGAGCTAGCGCAAGTATCTGCTATGGAGGTGAGGTACAATTGTTCAAAGCAAGAGGTTGAGAAAGTAGTTGTTGCCTGTGAAGGTGATATTCAGAAAGCAGAAAATACCTTAAAATCCCAGAAGCAGGAGTCTCCTGTGATCCAATCAAAGTCAGAAGATTCTGCTCGAAATAGTAGCTTGGTGAGATCACAAGGGTTACCAACAGCTTCAGTTTCAATGCAACAGAGAGGGAATGACAGTGACTTTTACCATTCCAAAGTAGGTGGTGGTGCTTCTATGCTCCCAGATCCTGAAAGCAAGAATCTACAGTCTTTACACTCAAATCATCAAATTGAACCGACAGATAAAAGATGGGGTGTTACTGGATCAAGCCCTTCTACTATGTTAATGATGCCACCAGCCATGAAAGCACAGTCTCCATTTGCTAGAGTAGATGCCCAGCCTAGTGCCCTTTGGAATGAAGGGAGAATGATTCAACAAGGATTTGGAAGGGAGCCAGTAGTCATGATGCAGCATCCACAATTCTCAAATGGCAAGCAAAATTCTATGTCTTCTATAAATGCCTTACCTTCAGGGACAGAAGGTTGGTATACAAATAATATTCCATCTGCTGAAAATACAAGGTCAAATGGGAGATTACTACAAAATTGCGACATAGGAAGTGCAGGTACACAACACGTAGAGAAATTTTGTCGATCTCCTTATAATGAATATTCCAATGTCTTGGGGCCAGTAGACTCCTTATCACCCGGAGTGGGAGGTTTCTATAAGCCAATGCGTGCATCATCACCATCGCCTTCACCTACAATCCGTCCTCAACATCAGGGTTCATGGAGCACAAGAGCATCTTCACCAGCACTTACATTTCCACAATCACTTGGGCTTTTTTCTGGTCATCAGAATGCAGCAGACAGAACATTCAGCCCACATTTACATGTGGATTGGAACAATGGCCGCTTAATGTCAGAATTTGACTACACCAATATAGATTGGACTTTCTATACTTTAGATTGCCGACCATCTCCCGAATCAGGTGGATTGTGGTTAGGGATTTCATCATTGTTGAGAAACAGTTCTCAGAGTAAGATGATGGGCAGTTCTTCATACATGGCTGGATTGCAAAATGGTGGCATGGCTAAGGAATCTTCAACCTCTGCTGGTTTGCGAGAGTGGACAACTCCTTTTGCTGGGAAGGACATATTCAGTGTTCCTAGGCAGTTTGTTACCTCTACTCTATAG 2094 0.4217 KRKYFILLLLECRNQNDIKIRKRKKEQTTHKRHSFFTGSVLVHSTDKATNSKTLNTMSPSLKSKSMSKAKASARARKEQQKCSPKTSVTTNHGSGIPTTAYNPISGTFHTLETSLVASSAPLHHNSHFLKIDDTDDNSSSLQGTVSECDSFSNNGSCSGESEDHKEKVANSSMRPDTIPGCDNEKREKIRLKNERKHQRQRERRAQELHERCSGYLMSRKLEALSQQLVAMGFSSERATLALMLNDGKLEESVSWLFEASEDKSHTKGTTTNLLSEGNLKIDISEELAQVSAMEVRYNCSKQEVEKVVVACEGDIQKAENTLKSQKQESPVIQSKSEDSARNSSLVRSQGLPTASVSMQQRGNDSDFYHSKVGGGASMLPDPESKNLQSLHSNHQIEPTDKRWGVTGSSPSTMLMMPPAMKAQSPFARVDAQPSALWNEGRMIQQGFGREPVVMMQHPQFSNGKQNSMSSINALPSGTEGWYTNNIPSAENTRSNGRLLQNCDIGSAGTQHVEKFCRSPYNEYSNVLGPVDSLSPGVGGFYKPMRASSPSPSPTIRPQHQGSWSTRASSPALTFPQSLGLFSGHQNAADRTFSPHLHVDWNNGRLMSEFDYTNIDWTFYTLDCRPSPESGGLWLGISSLLRNSSQSKMMGSSSYMAGLQNGGMAKESSTSAGLREWTTPFAGKDIFSVPRQFVTSTL 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0739 697 MobiDBLite consensus disorder prediction 139 206 - -
Lal2g0739 697 MobiDBLite consensus disorder prediction 82 97 - -
Lal2g0739 697 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 57 695 - -
Lal2g0739 697 MobiDBLite consensus disorder prediction 545 568 - -
Lal2g0739 697 Coils Coil 301 328 - -
Lal2g0739 697 PANTHER DOMAIN PROTEIN, PUTATIVE-RELATED 57 695 - -
Lal2g0739 697 MobiDBLite consensus disorder prediction 321 366 - -
Lal2g0739 697 MobiDBLite consensus disorder prediction 321 403 - -
Lal2g0739 697 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 207 259 IPR015940 -
Lal2g0739 697 SUPERFAMILY UBA-like 223 262 IPR009060 GO:0005515
Lal2g0739 697 MobiDBLite consensus disorder prediction 139 158 - -
Lal2g0739 697 SMART uba_6 221 258 IPR015940 -
Lal2g0739 697 Gene3D - 181 270 - -
Lal2g0739 697 Coils Coil 181 201 - -
Lal2g0739 697 MobiDBLite consensus disorder prediction 547 568 - -
Lal2g0739 697 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0739 Lal-Chr2 4666600 4669907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0739 598 697 EF-hand Containing Proteins AT5G12120 34.286 9.29e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0739 2 4666600 4669907 Lal2g0739 2 4666600 4669907 ECH
Lal1g0660 1 4321479 4323395 Lal2g0739 2 4666600 4669907 LSH