Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0736 ATGGGAGAAGAGAGTTATAGAGAGCCATTGTTGAAGAAAAATTACTATGAAAACTGCCCTGGTTGTAAGGTAGATGAAGCCAAAGAACTGAAGAAGGGTATATCCATTCAAAATCTTTTGATTGTTTGGATGGTGGTGATAAGTGCATCTCTCCCTATATCATCTCTCTTTCCATTCCTTTACTTCATGGTAAGGGATTTTGATATTGCAAAAACAGAAGAAGATATAGGTTCCTATGCTGGTTATGTAGGATCTGCATTCATGCTTGGAAGAGCTTTGACATCTGTATTATGGGGAATGATAGCCGACCGTTATGGTCGAAAACCGGTTATAATTATCGGGGTTATTACAGTTGTCATTTTCAACACATTGTTTGGCCTGAGCACAAGTTTTTGGATGGCTGTTATCACAAGATTTCTTCTTGGAAGTTTATGTGGTGTGCTTGGACCAGTGAAGGCCTATGCTACAGAACTTTTTCGAGAAGAACACCAAGCTATTGGATTATCAACTGTCAGTGCAGCTTGGGGCATAGGCTTAATCATTGGACCAGCATTGGGAGGCTATTTGTCTCAGGAAACACTTCACAATCACAATGGCGACACTGAGTCTATAGATGACACTGAGGCTTTAGAAAATGGAAGCAGTGAAACTTGCAAAGACAAGATAGTCCAGAAGAATGAAAACCTACTACTTAATTTGCCCTTAATGTCAGCTATTCTTATTTATAGTGTTTATGCACTTCATGATATTGCTTACCAAGAGGTTTTCTCATTATGGGCCGTTAGTCCTCGACGGTTGGGCGGTTTAAACTATACAACTGATGATGTCGGTAATGTTCTTTCAATATCAGGTTTGGCTCTAATCATCTACCAACTTACCCTATACCCTCCTTTGGAAAAAGCTTGTGGACCAATTAGCATTGCTCGCATTTCCGGGGTGTTATCCTTACCACTTTTGCAAATATACCCCTTCATAGCAATGTTATCAGGTTTAACATTGTTTATAGTGTTAAGTATGGCTTCTATTCTGAAGAATCTACTGGTTGCAACTGTTATAACAGGACTATTCCTTATGCAAAACAGATTAGTGGAACAACACCAGAGAGGGAAAGCTAATGGTATTGCCATGACTTGTATGTCATTGTTCAAAGCAATTGGTCCTGCTACTGGTGGTGCTTTATTAAGTTGGTCACAAAAGCGGATCGATGCTTCTTTTCTCCCAGGCACCCATATGGTTTTCTTGGTGATGAATATAGTTGGAGCAGTTGGAATAATCATGATGTTCACACCAATCCTTCGTCAAAAGAAGACAACAATATGTTCAAATCAGTAA 1332 0.3941 MGEESYREPLLKKNYYENCPGCKVDEAKELKKGISIQNLLIVWMVVISASLPISSLFPFLYFMVRDFDIAKTEEDIGSYAGYVGSAFMLGRALTSVLWGMIADRYGRKPVIIIGVITVVIFNTLFGLSTSFWMAVITRFLLGSLCGVLGPVKAYATELFREEHQAIGLSTVSAAWGIGLIIGPALGGYLSQETLHNHNGDTESIDDTEALENGSSETCKDKIVQKNENLLLNLPLMSAILIYSVYALHDIAYQEVFSLWAVSPRRLGGLNYTTDDVGNVLSISGLALIIYQLTLYPPLEKACGPISIARISGVLSLPLLQIYPFIAMLSGLTLFIVLSMASILKNLLVATVITGLFLMQNRLVEQHQRGKANGIAMTCMSLFKAIGPATGGALLSWSQKRIDASFLPGTHMVFLVMNIVGAVGIIMMFTPILRQKKTTICSNQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0736 443 PRINTS Tetracycline resistance protein signature 111 135 IPR001958 GO:0022857
Lal2g0736 443 PRINTS Tetracycline resistance protein signature 168 190 IPR001958 GO:0022857
Lal2g0736 443 PRINTS Tetracycline resistance protein signature 371 394 IPR001958 GO:0022857
Lal2g0736 443 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 435 IPR020846 GO:0022857
Lal2g0736 443 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 191 - -
Lal2g0736 443 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 192 438 - -
Lal2g0736 443 Pfam Major Facilitator Superfamily 255 429 IPR011701 GO:0022857|GO:0055085
Lal2g0736 443 Pfam Major Facilitator Superfamily 42 191 IPR011701 GO:0022857|GO:0055085
Lal2g0736 443 CDD MFS_SLC46_TetA_like 42 428 - -
Lal2g0736 443 SUPERFAMILY MFS general substrate transporter 38 436 IPR036259 -
Lal2g0736 443 Gene3D MFS general substrate transporter like domains 36 199 IPR036259 -
Lal2g0736 443 Gene3D MFS general substrate transporter like domains 208 429 IPR036259 -
Lal2g0736 443 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 191 - -
Lal2g0736 443 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 192 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0736 Lal-Chr2 4641017 4655113 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0736 2 4641017 4655113 Lal2g0736 2 4641017 4655113 ECH
Lal1g0665 1 4354033 4360396 Lal2g0736 2 4641017 4655113 LSH