Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0731 ATGTCTTCCCCACTATTCTATGGTAAAGTAGATGAATCTGAGCATGCTATGCTCCAAGTTCGACGAAGAACTCGAAAAAGAATCACTATCATATCATTGTCTACAATAGTCCTTGTTGGTATTGTATGTGCTGCTGTGTTTGGAAGTGTTGCTCACAAAAATGCTCATGATAATTCAAATAATGGTAATGGCAATGATAATGGTGCATCTATTTCCAATGCTGTGAAAGCTGTTTGTGATGTTACATTATACAAGGATGCATGTTATAGAAGCTTTGCTCCTTTGGTGCACTCAGATCAGCTTACACCTGAGGATTTGTTCAAGTTATCAATCAAAGTGGCTTTGGTTGAGGTTTCCAATGCTCTTCAGAAATTCTCTGATCAGGGTTTTTTTGTGGGATTGAATAGTGATAATAGGACTAAGGAAGCTTTGAATAATTGCAAGGATCTTTTGGGTCTAGCTGTTGATCATCTTAATAGTTCTTTGTCTTCTGGGGGAAACTCTTCCTTGTTTGATGTTTTTGATGATCTTGCAACTTGGTTAAGTGCTGCAGGTTCTTACCAACAGACATGCATTGATGGATTGGAGGAAACAAAACAAACACTGAAGAACACTGTTGAGAGCTACCTCCAAAATTCTACAGAGTTCACTAGTAACAGTCTTTCCATCATAACTTGGATTAACAATGTTGCAAACACAGTAAACTTGAGGCGCTTATTGAGTTTGCCTTATCAAAATGAAGAACCAAAGTGGCTTCATTCCAAAGACCGGAAGCTACTTGAAACAGTTGATTTGAAAAAGAAAGCTGATATTGTTGTGGCCAAAGATGGCAGTGGAAAGTATAAAAAAATTTCTGATGCACTTAAAGCTGTCAAAGATAAAAGTAAGAAGAGGACTGTGATCTATGTGAAGAAAGGGACTTACTATGAAAATGTGAGGGTGGAGAAGAACAAATGGAATGTCATGATCATTGGTGATGGTATGAGTGCTTCAATTGTATCTGGCAGACTTAACTTTATAGATGGCACCCCAACATTTTCATCTGCAACATTTGCTACATTTGGGAAGAATTTCATTGCTAGGGACATGGGTTTTCGGAACACAGCAGGTGCAGAAAAGCATCAGGCAGTGGCAGTAATGACAAATTCTGATCAATCAGTTTATTATAGGTGTACATTTGATGCATTTCAAGACACTCTCTATGCTCACGCCAATCGCCAATTCTACAGAGAATGCAACATATATGGGACAGTTGATTTCATTTTTGGAAACTCTGCAGTTGTAATACAAAACTCCAACATTTTTCCTAAGGTTCCTATGCAGGGTCAGCAGAACACAATCACAGCACAAGGCAAAATTGACCCTAACATGAACACAGGAATCTCAATTCAGAATTGCACCATTTCACCCTTTGGGGACTTAAGTTCTGTCCAAACATACCTTGGAAGACCTTGGAAGAATTACTCAACCACAGTGTTTATTCAGTCCCATCTTGCAAGCTTCATTAGCCCAAAGGGTTGGTTACCATGGGTAGGGAACTCAGCACCAGATACCATATTTTATGCAGAGTTTCAGAATGATGGACCAGGTGCTTCAACAAAGAATAGGGTGAAGTGGAAGGGTTTGAAAACCACCCTTAATAGTAAACAAGTTAAGAAGTTTACAGTCAAGGCTTTTCTTTCAGGAGACAAATGGATTCCGGATTCTGGTGCCTCTTATAAATCATCTCTGTGA 1734 0.3893 MSSPLFYGKVDESEHAMLQVRRRTRKRITIISLSTIVLVGIVCAAVFGSVAHKNAHDNSNNGNGNDNGASISNAVKAVCDVTLYKDACYRSFAPLVHSDQLTPEDLFKLSIKVALVEVSNALQKFSDQGFFVGLNSDNRTKEALNNCKDLLGLAVDHLNSSLSSGGNSSLFDVFDDLATWLSAAGSYQQTCIDGLEETKQTLKNTVESYLQNSTEFTSNSLSIITWINNVANTVNLRRLLSLPYQNEEPKWLHSKDRKLLETVDLKKKADIVVAKDGSGKYKKISDALKAVKDKSKKRTVIYVKKGTYYENVRVEKNKWNVMIIGDGMSASIVSGRLNFIDGTPTFSSATFATFGKNFIARDMGFRNTAGAEKHQAVAVMTNSDQSVYYRCTFDAFQDTLYAHANRQFYRECNIYGTVDFIFGNSAVVIQNSNIFPKVPMQGQQNTITAQGKIDPNMNTGISIQNCTISPFGDLSSVQTYLGRPWKNYSTTVFIQSHLASFISPKGWLPWVGNSAPDTIFYAEFQNDGPGASTKNRVKWKGLKTTLNSKQVKKFTVKAFLSGDKWIPDSGASYKSSL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0731 577 Gene3D - 265 577 IPR012334 -
Lal2g0731 577 PANTHER PECTINESTERASE 5 574 - -
Lal2g0731 577 Pfam Plant invertase/pectin methylesterase inhibitor 74 223 IPR006501 GO:0004857
Lal2g0731 577 PANTHER PECTINESTERASE 5 574 - -
Lal2g0731 577 SMART PMEI_2 70 223 IPR006501 GO:0004857
Lal2g0731 577 TIGRFAM PME_inhib: pectinesterase inhibitor domain 72 227 IPR006501 GO:0004857
Lal2g0731 577 Pfam Pectinesterase 270 563 IPR000070 GO:0030599|GO:0042545
Lal2g0731 577 Gene3D Invertase/pectin methylesterase inhibitor family protein 71 228 IPR035513 -
Lal2g0731 577 CDD PMEI-like_3 77 227 - -
Lal2g0731 577 Coils Coil 192 212 - -
Lal2g0731 577 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 227 IPR035513 -
Lal2g0731 577 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Lal2g0731 577 SUPERFAMILY Pectin lyase-like 268 573 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0731 Lal-Chr2 4598131 4600943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0731 1 577 Carbohydrate Esterase AT3G10710 56.649 0.0 674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0666 1 4361969 4365422 Lal2g0731 2 4598131 4600943 LSH