Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0726 ATGGCCGAAAACTGCTTACCGGTGGTCCTGCTCACCGGAAGTGGCCGTCCGGTACTTCTTCCAAACGAGATCGAATGTTTCTTCCTCTCCTCTGTTGACCTTCTCTGCGAAGACAACGAACCCAACGCTACCTCATTCCCTCACCTCAAATCGGGTCTCCTCATCCTCACCACTCACCGCCTCATATGGCTCTCCGATTCTCCCTCCTCTTCCGCATTCACTGTCCCCCTCGCCACGATCTCCCACATCTTCTCCCACAAGAAGTCCCTCAAGTCCATGTTCGCTTCCCCTAGGGTCCGCTTCCAGGTGTCTCTGTCGCCGGAAGGTAGGGTTTCGGCATCAGGTTCGAGTTCCGTTGTGGCGACGGTCGTGATGAGAGGGAAAGGGGACTGCGACGCGTTTTTAGCCAAATTTTGGGAAAATTGGAGGGGCAGGGCGTGGGAAGAAGCAGAAAGTGTTTCGAATTCGGGTTCGAGTTCGGGTTCAAATGTGGCGCCAGCAGCGTCTTCGGGAGGGTTTTATTCGAGTGACGGGACGGTGAGGATGGTGGGAGTGTCAGGGATATTGAGGAAGCAGCAGGAGATGTGGGAGAGTACTGATAGGAGCTTGCATGACGCTTTTCAGGATTTGAATGCTCTCATGAGCAAGGCTAAAGAGATGGTAATGCTAGCAGAGAAAATGAGGATACAACTTTTGTCTGGCTCAAGTTCTCAAGCTAATACAACTGGTGATGAGCAGATGGGCTCAAAGGAAGAGATGCAAGAATTGTTATTGAGTGTTGGTATTATATCCCCTGTTACCAAAGAGTCCGCAGGTGCTTTGTATCATCAACAGCTATCTCGTCAGTTGGCAGATTTTGTCAAAGTTCCACTTGAAAGAGCTGGAGGAATCATCAATCTTATTGATATTTATTGTCTATTCAACCGTGCTCGTGGCACAGAATTGATCTCACCTGATGATCTGTTGCAAGCATGTTCTCTGTGGGAGAAGTTTGATGTCCCAGTAGTTCTACGTAAGTTCGATAGTGGAGTCATGGTAATACAGGCGAAGTCTCACAGTGATGAACAGGTTATCTCTAAAATCAAGATACTTGCTATGAAGCCTGATGCTCTTCGATCTGGGATTAGTGCTAGTGATGCTGCAAAGACACTGGGAGTTGCCCCAGCAATGGCAAAGGAGCATCTAATGTCTGCTGAGAGCAAGGGTGTACTATGCAGAGATATAAGCCCTGATGGATTTCGCTTTTATATTAACTTGTTCCTTGAATTTGATCGAGATGATATGTATTTAGTGAAAGACCAAGGGCTTTATGCCCCATGGGTTAGGGCAAACCATGCTCGTGGGTAG 1347 0.4833 MAENCLPVVLLTGSGRPVLLPNEIECFFLSSVDLLCEDNEPNATSFPHLKSGLLILTTHRLIWLSDSPSSSAFTVPLATISHIFSHKKSLKSMFASPRVRFQVSLSPEGRVSASGSSSVVATVVMRGKGDCDAFLAKFWENWRGRAWEEAESVSNSGSSSGSNVAPAASSGGFYSSDGTVRMVGVSGILRKQQEMWESTDRSLHDAFQDLNALMSKAKEMVMLAEKMRIQLLSGSSSQANTTGDEQMGSKEEMQELLLSVGIISPVTKESAGALYHQQLSRQLADFVKVPLERAGGIINLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVPVVLRKFDSGVMVIQAKSHSDEQVISKIKILAMKPDALRSGISASDAAKTLGVAPAMAKEHLMSAESKGVLCRDISPDGFRFYINLFLEFDRDDMYLVKDQGLYAPWVRANHARG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0726 448 Pfam EAP30/Vps36 family 183 407 IPR040608 -
Lal2g0726 448 Gene3D - 351 422 IPR036388 -
Lal2g0726 448 Gene3D - 272 349 IPR036388 -
Lal2g0726 448 SUPERFAMILY "Winged helix" DNA-binding domain 311 423 IPR036390 -
Lal2g0726 448 Gene3D - 11 154 IPR011993 -
Lal2g0726 448 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 11 427 IPR037855 GO:0000814|GO:0032509|GO:0043130
Lal2g0726 448 Pfam Vacuolar protein sorting protein 36 Vps36 12 103 IPR021648 GO:0032266|GO:0043130
Lal2g0726 448 Gene3D - 198 271 - -
Lal2g0726 448 ProSiteProfiles GLUE domain profile. 9 154 IPR021648 GO:0032266|GO:0043130
Lal2g0726 448 SUPERFAMILY PH domain-like 5 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0726 Lal-Chr2 4541172 4550617 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0726 2 4541172 4550617 Lal2g0726 2 4541172 4550617 ECH
Lal2g0726 2 4541172 4550617 Lal9g0656 9 4515360 4519996 LSH