Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0724 ATGAATCAATTGTTGCTTGTTTCATCTCATCAGTGTCCAGCTTCCATTTTCCACCATCCATCAATGGCTGCCACAACCACTGCAACTTGCTCATTTCATTTTCCATCTCCATCGCATTCTTCTCATTCTCACTTCCTTACCAATAACTACTCTCAACTTTTTCCCTCTCCATTCTCACCACACAAATTCAACAACACTTACACTTTCACAAACCTTGCGTCACGCCAAAATATCTGCATGCCCAAAGCCTTCTCTGCTTCTTTCACAAACCCAATTGTTTCTCTCAATAGAGAGCCAATGAATACTCCCTACAACGTTCTGATTACTGGCTCTACCAAAGGGATAGGGTATGCATTGGCAAGAGAGTTTCTAAAAGCTGGTGACAATGTCCTAATTTGCTCAAGATCACGTGAAAGGGTAGAGACTTCTGTCCAGAGCCTGAGAGAAGAATTTGGGGAGCATCATGTGTGGGGCACTAAATGTGACGTGAAGAGTGGAGAGGATGTGAAGAATTTAGTTTCATTTGCTCAAGAAAAACTGAAATACATTGATATATGGATTAATAATGCTGGGTCAAATGCATATAGCTATAAGCCACTTGCTGAGGCTTCAGATGAAGATCTTATTGAAATGGTTACAACAAATACACTTGGTTTGATGATATGTTGTCGCGAGGCAATGAAGATGATGGCAAGTCAGCCTCGTGGAGGTCATATTTTCAATATTGATGGAGCCGGTTCAGATGGAAGACCAACTCCCAGGTTTGCTGCATATGGAGCAACAAAGAGAAGTGTGGTGCACTTAACAAAGTCATTACAGGCAGAATTGCAGATGCAAGACGTTAAAAATGTCATGGTGCATAATCTTTCGCCAGGAATGGTAACAACAGATCTTCTCATGTCTGGTGCTAATACGAAGCAGGCAAAGTTTTTCATCAATGTCTTGGCTGAACCACCCGAAGTGGTTGCTGAATACTTAGTTCCTAACATTAGATCTATCCTTGCCAATGGATCAATGAAGCCAACTTACATTCGCTTCCTCACCGGTTTCAAAGCATATTCCCAAATATTTTCATGCCTTCTTTTATTACCTAACAGAGATTTGCATTCGGGGCAAGAAGGAACCGGTACATACTTGAAGATTGAACACCATAACATGTGCAATTTTTGCTTTGAAACAGTAATGGATGCCTATACTTGGTGTATTGTATCTTTCATTCCATTGGAAGAAAAGATGGCCAAACCAGTTTTTCATTCACAGCTACTTCTTTTAATTTTGTTTCTTGCCATTCATCTTTCAGAACAGTTACAATTTTCTCAGTCTGAGACACTTATGAAAGTCCAAAACCTTCTTGGTTACCCTTCAGTTCTAGCAAGCTTAAACAGCAACACAGATTACTGCAACATTGAACCTACCACATATTTTACACTAGTCTGCTATGAAGATAACTTAACACAGTTGCATGTAGTTGGAAACAGTGATTTTACTACTCCATTGCCTCAAAACTTCAACTCAGAAACACTATTTGACACACTAGGGAGTTTATCAAGCTTGAAAGTTCTCTCTTTGGTTTCTCTTGGTCTCTGGGGGGCTCTACCTGAAAGCATTGCTCAATTGTCTTCACTTGAAATACTTAACATTAGCTCAAATTACTTCAGTGGAAACATTCCACCTCAACTTTCATATTTGAGGAACCTTCAGTCAATGGTACTTGATTATAACAACTTCAATGGTCAAATTCCATCATGGATAGGCTCACTTCAAGGTTTGGCTGTGCTTAGTATGAAGAACAATTTCCTTAGTGGAAATGTTCCAACTTCAGTGGATGGCTTGCAAACTTTGAGAGTGTTAGATCTATCAAGTAATCAATTATCTGGGGTACCTAATCTTCACAATTTGGCAAACCTTCAAGTTCTTCAATTGGAAAACAACACCTTTGGACCTCATTTTCCTTCTCTGCCCACCAAGTTAGTCTCCATTGTGCTTAGAAATAATAGCTTTAGACTTGGTATCCCTTCTAATTTAAGCTCTTTCTATCAGCTTCAAAAGTTGGACCTTTCATTGAATGGTTTTGTGGGTCCTTTTCTGCCATCTTTATTGTCACTTCCTTCAATCAATTACCTTGATATTTCTTCAAATAAGCTTACTGGGATGCTTTTCAATAACTTGTCATGTAATGATGATCTCCATTTTGTAAATTTATCTTCAAATCTTCTGAAAGGGGAACTTCCTACTTGTTTGAAACCAAAGACCAAGGTTGTTTTGTATGCTAGAAACTGTTTATCAAGTGAGGACCAAAATCAACACCCTCCCAATTTCTGCAACAATGAGGCTCTGGCTGTAAAAATAATACCTCATCAACAGAAGCATAAGGAAACAAGGGGTAAATCAGTACTTGTTTCAAGTGTCGGAGGTAGCGCGCTGATTCTTGGACTTGTTATCTTGGTCATTAGCTGGGTTCATAAAAAACATGTTCAAAAAACACCTTCAAAGTTTACATTGGAGCAAGTTATCAGCCAGATTCAGGTACATGATGAAGATGAAGTGAAAACACCAACTAGGTCCACATTGGAGCTTATCATCAGCCAGGTTCATGATAGTGATGAAGTGAAAACAACACCTACAAAGTCCATAATGGAGCATATCATGAAAAGGGTTCCAGACAAAGATGCAGTGAAAACACTTACAATATCTATTAAAGAACATGTCATGAGCCTGGCACATAACAATCATGTTATGAGGCCACCTACAAGGTCCATAAAAGAACATTCATCATCTCTAAACACAGCAAAACTACTCACAGATGCAAGATATATATCACAAACAATGAAGATGGGAGCAAGTCTTCCTCCTTATAGGACCTTTGCTTTTGAGGAACTTAAGGAAGCTACAAATAATTTTGATGCATCATGTTTCATAAGTGAAGGACCATATGGTCAGATATATAAAGGGGTGCTCTCTGATGGAATGCATATTGCTATTAGAGGTTTGAAAATGAGAAAGAGACATAGCCCTCAGACTTATATGCACCATGTTGAGTTGATTTCAAAACTTAGGCATTCAAACTTGGTTAGTGCACTTGGACATTCTTTTGAGTGCAGCCAAGATGATTCAAGTGTCAGCACTATATTTCTCATATTTGAGTTTGTTCCAAACAGAAACTTAAGAAGCTGTGTCTCTGGATCCTGTGGTGAAAAGCTTTCTTGGACACAGAGAATAGGAGCAGCAATTGGAGTGGGGAAAGGCATTCAATTTTTGCACACTGGAATAGTACCTGGACTATATTCAAATAATCTGAAGATAACAGATACTCTTTTGGATAACAATCTTAATGTTAAAATAAACAGTTACAATCTGCCTCTCTCAGCTGAACCTAAGAGAATGGCCAGCAATGGAACTTCTCCTGGATTAAAAGGAAATGTCCAAGGAAGGATAAAGGATGCTGACAAGAATGATGTCTATGATATTGGTGTAATCTTGTTAGAAATCATTCTGGGACGACCAATCATGTTCTACAATGAAGTTGGAACACTAAAAGATCTTTTACAGGTAAGCATAAAAACTGATGATATAGCTAGAAGGAGTATTGTTGACCCAGCAATTCATAAAGAATGCTCAGATGAATCATTAATGAAAATGATGGAACTATGTGTAAGGTGTCTCTCTACTGAACCAACTGTTAGGCCTTCTGTGGAAGATGTTCTATGGAATTTGCAGTTTGCAGCACAAGTTCAGAATTCATGGAAAAGAGACTCAAATGATAACAAAGACTCACCTACATCACCCTCCCAGGATATATAA 3801 0.3854 MNQLLLVSSHQCPASIFHHPSMAATTTATCSFHFPSPSHSSHSHFLTNNYSQLFPSPFSPHKFNNTYTFTNLASRQNICMPKAFSASFTNPIVSLNREPMNTPYNVLITGSTKGIGYALAREFLKAGDNVLICSRSRERVETSVQSLREEFGEHHVWGTKCDVKSGEDVKNLVSFAQEKLKYIDIWINNAGSNAYSYKPLAEASDEDLIEMVTTNTLGLMICCREAMKMMASQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVMVHNLSPGMVTTDLLMSGANTKQAKFFINVLAEPPEVVAEYLVPNIRSILANGSMKPTYIRFLTGFKAYSQIFSCLLLLPNRDLHSGQEGTGTYLKIEHHNMCNFCFETVMDAYTWCIVSFIPLEEKMAKPVFHSQLLLLILFLAIHLSEQLQFSQSETLMKVQNLLGYPSVLASLNSNTDYCNIEPTTYFTLVCYEDNLTQLHVVGNSDFTTPLPQNFNSETLFDTLGSLSSLKVLSLVSLGLWGALPESIAQLSSLEILNISSNYFSGNIPPQLSYLRNLQSMVLDYNNFNGQIPSWIGSLQGLAVLSMKNNFLSGNVPTSVDGLQTLRVLDLSSNQLSGVPNLHNLANLQVLQLENNTFGPHFPSLPTKLVSIVLRNNSFRLGIPSNLSSFYQLQKLDLSLNGFVGPFLPSLLSLPSINYLDISSNKLTGMLFNNLSCNDDLHFVNLSSNLLKGELPTCLKPKTKVVLYARNCLSSEDQNQHPPNFCNNEALAVKIIPHQQKHKETRGKSVLVSSVGGSALILGLVILVISWVHKKHVQKTPSKFTLEQVISQIQVHDEDEVKTPTRSTLELIISQVHDSDEVKTTPTKSIMEHIMKRVPDKDAVKTLTISIKEHVMSLAHNNHVMRPPTRSIKEHSSSLNTAKLLTDARYISQTMKMGASLPPYRTFAFEELKEATNNFDASCFISEGPYGQIYKGVLSDGMHIAIRGLKMRKRHSPQTYMHHVELISKLRHSNLVSALGHSFECSQDDSSVSTIFLIFEFVPNRNLRSCVSGSCGEKLSWTQRIGAAIGVGKGIQFLHTGIVPGLYSNNLKITDTLLDNNLNVKINSYNLPLSAEPKRMASNGTSPGLKGNVQGRIKDADKNDVYDIGVILLEIILGRPIMFYNEVGTLKDLLQVSIKTDDIARRSIVDPAIHKECSDESLMKMMELCVRCLSTEPTVRPSVEDVLWNLQFAAQVQNSWKRDSNDNKDSPTSPSQDI 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0724 1266 SUPERFAMILY L domain-like 468 764 - -
Lal2g0724 1266 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 245 273 IPR020904 GO:0016491
Lal2g0724 1266 ProSiteProfiles Leucine-rich repeat profile. 613 634 IPR001611 GO:0005515
Lal2g0724 1266 Pfam short chain dehydrogenase 106 301 IPR002347 -
Lal2g0724 1266 PRINTS Glucose/ribitol dehydrogenase family signature 105 122 IPR002347 -
Lal2g0724 1266 PRINTS Glucose/ribitol dehydrogenase family signature 181 192 IPR002347 -
Lal2g0724 1266 PRINTS Glucose/ribitol dehydrogenase family signature 258 277 IPR002347 -
Lal2g0724 1266 PRINTS Glucose/ribitol dehydrogenase family signature 282 299 IPR002347 -
Lal2g0724 1266 Gene3D Phosphorylase Kinase; domain 1 928 1049 - -
Lal2g0724 1266 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 912 1257 - -
Lal2g0724 1266 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 421 823 - -
Lal2g0724 1266 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 421 823 - -
Lal2g0724 1266 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 912 1257 - -
Lal2g0724 1266 Pfam Protein tyrosine and serine/threonine kinase 973 1235 IPR001245 GO:0004672|GO:0006468
Lal2g0724 1266 MobiDBLite consensus disorder prediction 1247 1266 - -
Lal2g0724 1266 Gene3D Ribonuclease Inhibitor 559 651 IPR032675 -
Lal2g0724 1266 Gene3D Ribonuclease Inhibitor 652 779 IPR032675 -
Lal2g0724 1266 ProSiteProfiles Protein kinase domain profile. 967 1240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0724 1266 SUPERFAMILY Protein kinase-like (PK-like) 946 1240 IPR011009 -
Lal2g0724 1266 Gene3D - 104 339 - -
Lal2g0724 1266 CDD SDR_c 106 324 - -
Lal2g0724 1266 Gene3D Ribonuclease Inhibitor 439 558 IPR032675 -
Lal2g0724 1266 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 105 325 IPR036291 -
Lal2g0724 1266 Gene3D Transferase(Phosphotransferase) domain 1 1050 1262 - -
Lal2g0724 1266 Pfam Leucine rich repeat 564 624 IPR001611 GO:0005515
Lal2g0724 1266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 192 IPR002347 -
Lal2g0724 1266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 237 245 IPR002347 -
Lal2g0724 1266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 258 277 IPR002347 -
Lal2g0724 1266 PRINTS Leucine-rich repeat signature 614 627 - -
Lal2g0724 1266 PRINTS Leucine-rich repeat signature 702 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0724 Lal-Chr2 4519029 4532416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0724 453 802 Miscellaneous Gene Families AT3G03770 52.676 2.97e-99 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lal2g0724 PK_Tyr_Ser-Thr 1.5e-12 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0724 2 4519029 4532416 Lal2g0724 2 4519029 4532416 ECH