Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0714 ATGGAAGAGGGAAAACCTGGGATTGCTTCGGTTGATAATGGTGACAAATCTGATTCTCGTTTCGCCGAGTTCTGCAAGAATGGACTAGCATTAGATGAGAAAAGCTGTAAAGAAGCAATGAATCTGTTTGGACAAACCAAACATCTTCTACTGTCAAATGTTTCGTCAGTGGGGATTGGAACGTCTGAAGAAGCAGAGCGGTATTGGTTTGCTTTTATTTTATACTCTATCAAGAGGTTGAATCAGAAAAATGAGGAGATCGGGAAGGAAGATATCGATTACACTGGACTTACCTTGTGCCGAATAATGAGAGCAGCTAAGCTTAACATTGCAGATTTTTTCAGAGAACTTCCTCAATTTGTTGTTAAGGCTGGTCCAATTTTAAGTAATATATATGGCACGGATTGGGAAAACAGACTTGAGGCGAAGGAGATGCATGCCAATGCCATTCACTTAAAGATTCTTAGCAAGTACTACAAACGAGTATTTGGAGAGTTCTTTGTGGTGACTGATTCGACTGTTGAAAAGAACTCATCTGCGACTGTTCATGCATCTGAATACCTTCGCTTTGGATGGTTACTTTTTCTGGCACTTCGTGTGCATGCTTTCAGTCGTTTCAAAGACTTGGTGACTTCCACCAATGGTTTAATTTCGATCTTGGCTATCTTGGTTATTCATGTTCCTGCTCGCTTTCGGAATTTCAACATTAATGACTCAACTCGCTTTGTTAAGAGAAGTAACAAAGGTGTTGACCTCCTTGCATCACTTTGCAACATTTATAACACTTCAGAAGATGAGTTGAGGAAAACCATGGAGAAAGCCAATAATTTAATTGCAGATATATTGAAGAAGAAACCAAGTTTGGCATCTGAATGTGAAATTGAAAACCTAGAGAACTTTGATAAAGGCGATTTGACCTATTTTAATGATCTAATGGAGGAATTGTCTCTGCTATCCAGTTTAAATATCTTAGAAAAGGATTATGATGACATGATTGGCAACAAGGGTGAGCTGGATGAAAGGTTGTTCATTAATGAGGAAGACAGTTTGTTAGCTTCTGGAAGCATGTCTGGAGGTTCTGCTTCAGCAAGCTGTGTAAAGAGAAAATTTGATTTGATGTCATCTCCTGTTAAGACTATTTCAAGTCCACTCTCACCCCACCGCTCTCCTGCGTCTCATTCCAATGGTGTTCCGGGTATTGCAAATTCAAAGATGGCAGGCACCCCTGTAAGCACGGCAATGACAACTGCAAAGTGGCTTCGTACTGTCATTTCTCCACTTGCATCAAAGCCCTCAAAAGAGCTGGAGCGATTCTTGACATTGTGTGACAAGGATGTTACAAGTGATGTGGTGCGCAGAACACAGATTATTTTGCAGGCTATATTTCCTAGTAGCCCTCTTGGAGAAAGATGTGTAACTGGAAGTCTGCAAAGTGCAAATCTCATGGACAATATTTGGGCAGAACAGCGAAGATTGGAAGCCCTGAAGTTATACTATAGGGTACTGGAGGCAATGTGCAGAGCAGAGGCTCAAATACTCCATACAACTAATTTGACCTCACTACTAACTAATGAGAGGTTCCATCGGTGTATGCTCGCCTGTTCTGCAGAACTAGTCCTGGCAACTCACAAGACAGTAACAATGTTGTTCCCTGCGGTGCTGGAAAGGACTGGAATTACGGCTTTTGATCTTAGCAAGGTGATTGAAAGTTTTATTAGACATGAAGAATCTCTCCCTAGAGAGTTGAGGCGACATTTGAATTCGTTGGAAGAACGACTTTTAGAGAGCATGGTATGGGAAAAGGGTTCATCGATGTATAATTCCTTAGTGGTTGCTAAACCTGCCCTCTCTGCAGAAATAAATCGTCTTGGACTGTTAGCTGATCCAATGCCATCATTGGACGAAATTGCAATGCAAATCAATTTCTCTTGTGGAGGGTTGCCTCCTTTGCCTTCCTTGCCTAAGCTTGAGTCCTCACCAACTCAGAATGGGGATATGAGATCACCAAAGCGACTCTGTACTGAATATCGAAATTTGTTGGCTGATCGAAATTCTTTCACTTCACCAGTGAAAGACCGGCTACTTCACTTCAGCAACCTTAAGTCAAAGCTACCCCCACCTCCTTTGCAATCCGCCTTTGCAAGTCCAACAAAACCAATTCCAGGAGGCGGAGGAGAAACATGTGCAGAAACTGGGATCAACATCTTTTTCAGCAAGATCATTAAGTTGGGAGCAGTCAGAATAAGTGACATGGTTGAAAGGCTACAATTATCTCAGCAGATAAGGGAGAATGTATACCGTCTTTTCCAGAAAATCCTTAATCAATGCACATCTCTCTTCTTCAACCACCATATTGACCAAATCATTTTGTGTTGCCTATATGGAGTTGCAAAGATTTCTCAATTGAACCTAACTTTTAGGGAGATCATAAACAACTATAGAAAACAACCACAATGCAAACTACAAGTTTTTCGCAGTGTATTTGTTGATTGGTCGTTGACACACCGTAAGGGGAGAGCTGGACAGGAGCATGTTGACATCATTACATTTTACAATGAAATATTCATTCCATCTGTAAAGCCGCTGCTAGTTGAACTTGGCCCTGGGGAAACAAATATGAAAAGCACCCGGATACCTGAAGTTAATAATAAAAATGATGGCCATTTGGCTCAATGTCCTGGGTCGCCTAAAATATCTCCTTTCCCAAGCCTTCCTGATATGTCTCCAAAAAAAGTGACTTCCTCACGCAATGTTTATGTTTCACCATTACGGTCATCTAAGATGGATGCTCTAATATCACATAGCTCAAAAAGTTATTATGCATGTATTGGGGAGAGCACTCATGCATATCAAAGCCCTTCAAAAGACTTGACTGCCATCAATAACCGTTTGAACAGGAAGGTCAGAGGTCCTCTGAATTTCGATGAAGTCGATGTCGGTTTGGTTAGTGACTCTCTGGTTGCAAACAGCTTCTATCTACAGAATGGAAGTTGTGCATCATCATCAGGTGCACCATTGAAGCCTGAGCAACCTGACTGTTAA 3042 0.4139 MEEGKPGIASVDNGDKSDSRFAEFCKNGLALDEKSCKEAMNLFGQTKHLLLSNVSSVGIGTSEEAERYWFAFILYSIKRLNQKNEEIGKEDIDYTGLTLCRIMRAAKLNIADFFRELPQFVVKAGPILSNIYGTDWENRLEAKEMHANAIHLKILSKYYKRVFGEFFVVTDSTVEKNSSATVHASEYLRFGWLLFLALRVHAFSRFKDLVTSTNGLISILAILVIHVPARFRNFNINDSTRFVKRSNKGVDLLASLCNIYNTSEDELRKTMEKANNLIADILKKKPSLASECEIENLENFDKGDLTYFNDLMEELSLLSSLNILEKDYDDMIGNKGELDERLFINEEDSLLASGSMSGGSASASCVKRKFDLMSSPVKTISSPLSPHRSPASHSNGVPGIANSKMAGTPVSTAMTTAKWLRTVISPLASKPSKELERFLTLCDKDVTSDVVRRTQIILQAIFPSSPLGERCVTGSLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQILHTTNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLVVAKPALSAEINRLGLLADPMPSLDEIAMQINFSCGGLPPLPSLPKLESSPTQNGDMRSPKRLCTEYRNLLADRNSFTSPVKDRLLHFSNLKSKLPPPPLQSAFASPTKPIPGGGGETCAETGINIFFSKIIKLGAVRISDMVERLQLSQQIRENVYRLFQKILNQCTSLFFNHHIDQIILCCLYGVAKISQLNLTFREIINNYRKQPQCKLQVFRSVFVDWSLTHRKGRAGQEHVDIITFYNEIFIPSVKPLLVELGPGETNMKSTRIPEVNNKNDGHLAQCPGSPKISPFPSLPDMSPKKVTSSRNVYVSPLRSSKMDALISHSSKSYYACIGESTHAYQSPSKDLTAINNRLNRKVRGPLNFDEVDVGLVSDSLVANSFYLQNGSCASSSGAPLKPEQPDC 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0714 1013 PANTHER BNACNNG22930D PROTEIN 1 1000 - -
Lal2g0714 1013 Coils Coil 260 284 - -
Lal2g0714 1013 SMART DUF3452_2 80 226 IPR024599 -
Lal2g0714 1013 SMART RB_A_2 408 609 IPR002720 GO:0005634|GO:0051726
Lal2g0714 1013 Pfam Retinoblastoma-associated protein A domain 408 609 IPR002720 GO:0005634|GO:0051726
Lal2g0714 1013 MobiDBLite consensus disorder prediction 380 403 - -
Lal2g0714 1013 Pfam Retinoblastoma-associated protein B domain 733 860 IPR002719 GO:0005634|GO:0051726
Lal2g0714 1013 Gene3D - 187 345 - -
Lal2g0714 1013 SUPERFAMILY Cyclin-like 416 611 IPR036915 -
Lal2g0714 1013 SUPERFAMILY Cyclin-like 731 903 IPR036915 -
Lal2g0714 1013 Gene3D - 411 599 - -
Lal2g0714 1013 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 1 1000 IPR028309 GO:0006357|GO:0051726
Lal2g0714 1013 Gene3D - 687 884 - -
Lal2g0714 1013 Pfam Domain of unknown function (DUF3452) 95 226 IPR024599 -
Lal2g0714 1013 SMART cyclin_7 746 864 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0714 Lal-Chr2 4414789 4422286 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Lal2g0714 RB_A 4.1e-64 CL0065
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0714 2 4414789 4422286 Lal9g0623 9 4250400 4258098 LSH