Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0667 ATGGATTCTATGTTCTCTCTGAAACCCCATAGTCACAGTGTGTTTCTGAAAGCACCTTCTTCCTCTCTCTTTCTCCCTCTCAACTTCCTCTCCTTTCGTCCTCTCTCTGCTTCCAAACACGCCAAGGTTCAGTGTGACCTTGAATCCAAACTCAATGCTTCTCTTTCTGCTCATTCTGACTCTCTTTTTCTTGATAGGCAAAAAGCACTAGAAGCTGCGATGAATGATATAAACAACTCATTTGGAAAGGGAAGTGTTACAAGATTGGGTAGTGCTGGTGGAGCTCTGGTTGAAACTTTTCCCAGTGGCTGTTTGACACTAGACTGTGCTTTAGGTGGTGGTCTTCCAAAAGGAAGAATTGTAGAGATATTTGGACCAGAAAGCAGTGGTAAGACAACCCTTGCACTCCACGCTATTGCAGAAGTGCAGAAGTTGGGTGGCAATGCAGTGCTTGTTGATGCTGAGCATGCTTTTGATCCAACATATTCTAAAGCCTTAGGAGTGGATGTAGAAAATTTGATTGTCTGTCAACCTGATCATGGAGAGATGGGTCTTGAGATCGCAGACCGTCTGTGCAGATCTGGAGCTGTAGATCTCATTTGCGTGGATTCTGTCTCAGCTCTCACTCCACGAGCAGAAATTGAAGGTGAGATTGGAATGCAGCAAATGGGATTGCAGGCTCGTCTTATGAGCCAAGCTTTGCGTAAGATGTCTGGAAATGCATCTAAAGCTGGTTGTACTCTTATATTTTTGAATCAAATAAGATATAAGATTGGTGTCTATTATGGAAATCCAGAAGTGACAAGTGGTGGAATTGCATTGAAGTTCTTTGCATCACTTCGGCTAGAAGTTCGTTCTATAGGGAAGATAAAGTCTGCTAAAGGTGATGAAGAAATTGGCCTTAAAGTTCGCGTAAGAGTGCAAAAGAGCAAGGTATCAAGGCCATACAAAACAGCGGAATTTGAGATTATATTTGGAGAGGGCGTTAATAAGCTGGGTTGCATTTTAGATTGTGCAGAAATGATGGATGTTGTCTTAAAGAAGGGCTCTTGGTATAGCTATGGGGATCATCGGTTAGGACAGGGAAGAGAGAAAGCAATTCAGTACTTAAAGGAGAACACACATCTATTAGAAGAAATTGAGAAGGTAGTTCAGTCTTCATTGATAGATGGAACTAACCAAACAAGCCATGCATACACGAAGAATAGTCCAGTACTCAATCAAGATGATGATATATTCGAGGGGAATCAATGA 1254 0.4203 MDSMFSLKPHSHSVFLKAPSSSLFLPLNFLSFRPLSASKHAKVQCDLESKLNASLSAHSDSLFLDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAVLVDAEHAFDPTYSKALGVDVENLIVCQPDHGEMGLEIADRLCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRSIGKIKSAKGDEEIGLKVRVRVQKSKVSRPYKTAEFEIIFGEGVNKLGCILDCAEMMDVVLKKGSWYSYGDHRLGQGREKAIQYLKENTHLLEEIEKVVQSSLIDGTNQTSHAYTKNSPVLNQDDDIFEGNQ 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0667 417 PRINTS RecA protein signature 153 182 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal2g0667 417 PRINTS RecA protein signature 187 216 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal2g0667 417 PRINTS RecA protein signature 225 254 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal2g0667 417 PRINTS RecA protein signature 270 298 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal2g0667 417 PRINTS RecA protein signature 305 334 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal2g0667 417 PRINTS RecA protein signature 359 376 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal2g0667 417 PANTHER RECA 64 404 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal2g0667 417 Gene3D - 95 399 IPR027417 -
Lal2g0667 417 PANTHER MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG 64 404 - -
Lal2g0667 417 Pfam recA bacterial DNA recombination protein 68 330 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal2g0667 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 329 IPR027417 -
Lal2g0667 417 SMART AAA_5 117 288 IPR003593 -
Lal2g0667 417 CDD recA 65 388 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal2g0667 417 ProSiteProfiles RecA family profile 2. 259 334 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lal2g0667 417 ProSiteProfiles RecA family profile 1. 96 254 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Lal2g0667 417 Hamap Protein RecA [recA]. 66 391 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal2g0667 417 SUPERFAMILY RecA protein, C-terminal domain 331 385 IPR023400 -
Lal2g0667 417 ProSitePatterns recA signature. 273 281 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lal2g0667 417 TIGRFAM tigrfam_recA: protein RecA 65 385 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0667 Lal-Chr2 4006949 4013504 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0667 2 4006949 4013504 Lal2g0667 2 4006949 4013504 ECH
Lal1g0622 1 3969913 3977622 Lal2g0667 2 4006949 4013504 LSH