Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0664 ATGGCAGAAGAAATCGTAAACGCATTTTCCTTACATAACCTGTTCACACGCCTGGTAGATTGCACGCTCTTTCGTCGCGCTACTATCCCAACCGATCAATACGACAGTGAAGAATGCAACTACGAGGTTATGGAGACTCTCGGACAAGGCGGTTTCGGGCGTGTTTATAAGTGCAAACATATCAGAACTGGTGAAATCGTCGCCATTAAGCAAATCGATTTTCGTCACGATAAGAATGTTCCATCTTTCCTCATCAGAGAAGTCTCTCTCCTTCGAGAACTCAAACATGACAACATTGTCCGTTTGTTGAATGTGTTGAGCAAGGAAACTTATGTTAGCCTCGTTTTTGAGCTTCTTGATGAAGATCTTGGTCGCTATATCAGGAATAACCATGGCGTTAAAGATCCTCTGATTAGAAAGAGCTTTATGCAGCAAATACTCACTGGTGTGGCATACTGTCATGCGCAGAAGATTCTGCACAGAGATCTGAAACCCTCAAATTTGCTGATCGATAAATCAAGAATGATGATCAAGATTGCTGATTTTGGTTTGTCCAGAGAATTTGGAGGAGACATGCTACTAACTAGACGTCCTGCAACTCGGTATTATAGGGCACCTGAAATCTTGCTTGGCTCCCGTCAATATTCAACTGGAGTTGATTTGTGGTCTGTGGGCTGTATATTTGGTGAGATGGTAACTGCACAGCCTATATTCGGAACTGATAATTCTTTTGATGAATTAGAGGCCATTTTCAGAATGTTAGGGACCCCCACTGAGGAAACGTGGCCGCAAGTCACAAAATTTACTCGCCTTCATTCCTATGCCAAATTTAGTCCAATGGACCTCTCAACTATTTTTGCTGATCTTGAACCACAGGGCCTTCATCTTCTTAAAATGTTGCTTTGCCCGGATCCAAAAAGAAGGGTCTCTGTCGAAGGTGCACTGAAGCATGCTTACTTTAATGACCCCCCTGAGCATCACAGAAGGTATCGCCTTATACTGCTCCCTTATGTTGGAAAATCGAAGGTGAAGTCCTGGGCAGGGGCAGCAGAACAAGTTTTGTAG 1065 0.4357 MAEEIVNAFSLHNLFTRLVDCTLFRRATIPTDQYDSEECNYEVMETLGQGGFGRVYKCKHIRTGEIVAIKQIDFRHDKNVPSFLIREVSLLRELKHDNIVRLLNVLSKETYVSLVFELLDEDLGRYIRNNHGVKDPLIRKSFMQQILTGVAYCHAQKILHRDLKPSNLLIDKSRMMIKIADFGLSREFGGDMLLTRRPATRYYRAPEILLGSRQYSTGVDLWSVGCIFGEMVTAQPIFGTDNSFDELEAIFRMLGTPTEETWPQVTKFTRLHSYAKFSPMDLSTIFADLEPQGLHLLKMLLCPDPKRRVSVEGALKHAYFNDPPEHHRRYRLILLPYVGKSKVKSWAGAAEQVL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0664 354 Gene3D Phosphorylase Kinase; domain 1 36 120 - -
Lal2g0664 354 PANTHER CELL DIVISION PROTEIN KINASE 30 324 - -
Lal2g0664 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Lal2g0664 354 Pfam Protein kinase domain 41 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0664 354 ProSiteProfiles Protein kinase domain profile. 41 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0664 354 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Lal2g0664 354 PANTHER CYCLIN-DEPENDENT KINASE 30 324 - -
Lal2g0664 354 CDD STKc_CDK_like 41 320 - -
Lal2g0664 354 SUPERFAMILY Protein kinase-like (PK-like) 40 324 IPR011009 -
Lal2g0664 354 Gene3D Transferase(Phosphotransferase) domain 1 121 332 - -
Lal2g0664 354 SMART serkin_6 41 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0664 Lal-Chr2 3997189 3999993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0664 40 322 Core Cell Cycle Gene Families AT3G48750 47.038 9.98e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lal2g0664 Pkinase 4.4e-72 CL0016