Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0642 ATGTGGTTTCAGATTTCAAACTTCAAACTTGTCTATGTTCTTTTCTTGGGGTTTCTATTTCTGATATGCTTTCAAGGATTTGAATCCAACGCTCAACTCATACCACAAGAAGAAGTGAATGTTCTACAAGCAATATCTGATAAACTAGAGAGCTTGAACTGGAAAGTAACAGAACGTTCCTGCATAGAGGATCAAGGATTTAACGAAAAAACTAATATAAATGATGACATTGTAAGGAACATCACATGTGATTGCACTTTCCAATCTAGCACTGTTTGCCATGTTACCAACATCTTGCTCAAGGGTCTAAATATATCTGGAGTTATGCCTAGTGAATTTGGAAATCTCACTCATCTAACAGTACTTGATCTCACACGCAACTATCTCAATGGCTCAATACCTAAGAGTTTTGCGCAAACATCGCTCATCGTTTTGTCTCTTTTGGGAAATCGATTAAGTGGTTCGATACCCTCAGAAATTGGCGACATTGCTAATCTGGAGGAACTGAACTTAGAAGATAATCAGCTTGGAGGACCACTTCCCCCGAGTCTTGGAAATTTGAGCAAGTTGAAGAGACTACTTCTTTCTGCAAATAATTTTACAGGGATAATACCAGAAACATTTAGCAAACTAAAGAATCTGACTGATTTTAGGATAGATGGGAGCAGTTTATCTGGAAAGATACCTGTTTTTATTGGGAACTGGACCAAACTTGACAGATTGGATCTGCAAGGAACATTTATGGAAGGCCCAATTCCCTCTACCATATCTGAGTTGAAAATTTTAACTCAATTGAGAATAAGTGATTTGAATGGATCAACTATGACATTTCCTGATCTGGAGAATTTGAAGAACTTGAAACGACTAGACCTAAGCTTCAACATGTTGACCGGTTCAATACCAGATTCATTTCAGGACTTGGATGGGCTAGATTACATGTTTCTGACTAACAATTCTCTGAATGGACAGATTCAAGATTGGATACTGGACTGGAAAAAAAATTTAACACCATATAGTATCCTGTCAGTTTCGCCTCTTGTAATTAATCTCGCGTACTCATTGAATTACGAATATATTAAGATTCAATTTTACCTTGTTTTCTTTTTAAGGGATTTATCTTACAACAATTTTACAAAATCTTCTGCAACTACCTGCCAGCAGGAGGATTTGAACTTAGCTTCAAGCCATTCTTCTTCAGCAATCACTTCAAGAACCTACCTTGTCCAGGAAAATCACAATCATTCATTGTTCATAAACTGTGGAGGACCTGAAGGGGAGTTTGAGGGCTATAGCTATGTAGGCGATCTTCATCAAGATGGTATTTCAAACTTTGTTCTTAGGAATGAAGATCAATGGGCTTATAGCAGCACGGGAATATACCTGGGAAATGATTACGCTAATCATGTAGCAAAAAATACATTTTCTTTGAATATTAGTGGCCCAGACTACTACCAAACTGCCCGACTTTCCCCTCTATCACTAAAGTACTACGGCCTTTGTATGATGAAGGGAAATTACAATGTGAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAAACGTTTAGCAGTCTTGGAAGGCGTATATTTGATGTTTCAATTCAAGGTATTAAATATTTGAAAGACTTTAACATCATGCAAGAAACTGGTGGAGTTGGTAAGGGAATCACTAAGGAATTTGATGTGGATGTTAATGATAGCACCTTGGAAATCCACTTGTACTGGGCAGGGAAAGGAACTACTGCTATTCCTGACAGAGGTGTATATGGACCTCTTATATCTGCAATCACAGTCACACCAAACTTTAAAATTAAATCAGGAGGGTTGTCTGCTGGAGCAATTGGTGGAATTGTAGCTGCATCATGTGTGTTTGTCGTACTCATACTGGTTGCCCTTCGGAAGATGGGTTTCCTTGGTGGGAAAGATATAACAGACAAAGAACTTCTAGACCTGAAAACTGGTTATTTCAGTTTAAGACAAATTAAAGCAGCCACTAATAACTTCGACCCAGCAAATAAAATAGGTGAAGGAGGCTTTGGGCCAGTGTACAAGGGTGTACTTCCAGATGGTGATGTGATTGCTGTTAAGCAGCTCTCGTCCAAATCAAAGCAAGGGAATCGTGAATTCGTTAATGAAATAGGAATGATATCTGCTTTGCAGCATCCAAATCTTGTGAATCTTTATGGCTGCTGCATTGAATCAAACCAGTTGCTGCTAATATATGAATACATGGAGAACAATAGTCTTGCTCGCGCACTTTTTGGTAAACAAGAACAGAAACTGAACTTAGACTGGCCCACAAGAATGAAGATCTGTGTGGGGATAGCAAGGGGATTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTACACAGGGACATTAAGGCAACCAATGTCTTACTTGATAAGAATCTGAATGCCAAGATCTCTGACTTTGGTTTGGCGAAACTTGATGAAGAGGAGAATACCCATATCAGCACACGGATAGCGGGAACAATTGGTTACATGGCACCTGAGTATGCTATGCGGGGTTACTTGACCGACAAGGCAGATGTTTATAGCTTCGGAGTTGTAGCTTTAGAGATTGTTAGTGGAAAGAGCAACACAAATTACAGACCAAAAGAAGAGTTTGTTTATCTTCTGGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGATTTGGTGGATCCAAGTCTTGGTTCAAGGTACTCTTCAGTGGAGGCAATGAGAATGCTGAGCTTGGCTCTCTTATGCACCAACCCATCTCCAACTCTTAGGCCACCCATGTCATCTGTAGTACGCATGCTTGAAGGAAAAACTCCAATTCAAGCGCCGATAATCATGCGCGGCGAGAGTAGCGAGGATAGCCAACATGCAAGATTTAAAGCCTTGAAGTTGATATCACAAGACAGCCAAACTTTTGTTTCTTCCCAATTCTCACAAGAAAGTATGCAACAAAGAGACAAATCAGCAGATGGGCCATGGATTGACTCCTCCATATCTCTTCCAAGTGTAGATGATAGTTCTTCAACAAGCAAACTCCTTTGA 3060 0.3958 MWFQISNFKLVYVLFLGFLFLICFQGFESNAQLIPQEEVNVLQAISDKLESLNWKVTERSCIEDQGFNEKTNINDDIVRNITCDCTFQSSTVCHVTNILLKGLNISGVMPSEFGNLTHLTVLDLTRNYLNGSIPKSFAQTSLIVLSLLGNRLSGSIPSEIGDIANLEELNLEDNQLGGPLPPSLGNLSKLKRLLLSANNFTGIIPETFSKLKNLTDFRIDGSSLSGKIPVFIGNWTKLDRLDLQGTFMEGPIPSTISELKILTQLRISDLNGSTMTFPDLENLKNLKRLDLSFNMLTGSIPDSFQDLDGLDYMFLTNNSLNGQIQDWILDWKKNLTPYSILSVSPLVINLAYSLNYEYIKIQFYLVFFLRDLSYNNFTKSSATTCQQEDLNLASSHSSSAITSRTYLVQENHNHSLFINCGGPEGEFEGYSYVGDLHQDGISNFVLRNEDQWAYSSTGIYLGNDYANHVAKNTFSLNISGPDYYQTARLSPLSLKYYGLCMMKGNYNVKLHFAEIMFSDDQTFSSLGRRIFDVSIQGIKYLKDFNIMQETGGVGKGITKEFDVDVNDSTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFKIKSGGLSAGAIGGIVAASCVFVVLILVALRKMGFLGGKDITDKELLDLKTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGVLPDGDVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVNLYGCCIESNQLLLIYEYMENNSLARALFGKQEQKLNLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLDLVDPSLGSRYSSVEAMRMLSLALLCTNPSPTLRPPMSSVVRMLEGKTPIQAPIIMRGESSEDSQHARFKALKLISQDSQTFVSSQFSQESMQQRDKSADGPWIDSSISLPSVDDSSSTSKLL 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0642 1019 Gene3D - 412 602 - -
Lal2g0642 1019 Pfam Leucine Rich Repeat 165 187 IPR001611 GO:0005515
Lal2g0642 1019 CDD STKc_IRAK 675 942 - -
Lal2g0642 1019 ProSiteProfiles Protein kinase domain profile. 669 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0642 1019 PANTHER - 73 1001 - -
Lal2g0642 1019 Gene3D Transferase(Phosphotransferase) domain 1 745 951 - -
Lal2g0642 1019 MobiDBLite consensus disorder prediction 981 1019 - -
Lal2g0642 1019 Pfam Protein tyrosine and serine/threonine kinase 673 890 IPR001245 GO:0004672|GO:0006468
Lal2g0642 1019 Pfam Leucine rich repeat 281 320 IPR001611 GO:0005515
Lal2g0642 1019 Gene3D Ribonuclease Inhibitor 35 329 IPR032675 -
Lal2g0642 1019 MobiDBLite consensus disorder prediction 1005 1019 - -
Lal2g0642 1019 SUPERFAMILY L domain-like 82 336 - -
Lal2g0642 1019 SMART LRR_typ_2 283 306 IPR003591 -
Lal2g0642 1019 SMART LRR_typ_2 116 139 IPR003591 -
Lal2g0642 1019 SMART LRR_typ_2 187 210 IPR003591 -
Lal2g0642 1019 Pfam Malectin domain 416 597 IPR021720 -
Lal2g0642 1019 Gene3D Phosphorylase Kinase; domain 1 639 744 - -
Lal2g0642 1019 SMART serkin_6 669 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0642 1019 SUPERFAMILY Protein kinase-like (PK-like) 653 941 IPR011009 -
Lal2g0642 1019 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 1001 - -
Lal2g0642 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0642 Lal-Chr2 3829663 3840211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0642 18 1012 Receptor kinase-like Gene Family AT1G53440 58.897 0.0 1190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal2g0642 PK_Tyr_Ser-Thr 1.6e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0642 2 3829663 3840211 Lal2g0642 2 3829663 3840211 ECH
Lal2g0642 2 3829663 3840211 Lal9g0556 9 3769266 3781156 LSH