Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0578 ATGTCAATTTCTCCCTCACCTTCGTCTTCATCATCATCATCATCGTCTTCTTCATCTTCATCTTCATCTTCGTCGTTGGAATCTTCGAATAACGGGAAGACATGGATCATCAATGGCATTGTGGCAGGAATTGCAATTGCAGCAGCTGTGGGTGCACACACTTACCTTAACCGATTCAACAAATTCAGGAGCCGAGTTGTGGGTATCATCCCCGCCCGATTCGCTTCCTCTCGCTTCCAGGGAAAGCCTCTCGTTCAAATTCTTGGCAAGCCCATGATCCAGAGGACATGGGAAAGGGCAAAGTTGGCAGCTACATTGGATCATGTTGGTAGTCAAATTGGTAACTCTCTGGTTATAGTTGTGGCAACTGATGATGAAAAGATTGCTGACTGCTGTCGAAAATTTGGAGCTGATGTGATAATGACATCAGAATCTTGCCGAAATGGTACTGAGCGCTGCAATGAAGCCCTACAGAAGCTTGGGAAAAAATATGATGTTGTTGTCAACATTCAGGGTGATGAGCCTCTTATTGAACCTGAAATAGTAGACGGTGTTGTCAGAGCTTTGCAGGCAGCTCCGGATGCAGTGTTCAGCACTGCAGTCACATCTTTAAAGCCTGAAGATGCTCATGACCCAAATAGAGTGAAATGTGTGGTCGACAATCGTGGTTATGCCATCTATTTTTCACGAGGATTAATCCCATTCAACAAGTCAGGGAAGGTTAATCAACAGTTCCCTTATTTGCTTCATCTTGGGATTCAGAGCTATGATGCAAAGTTTCTAAAGATATATCCGCATCTTCAGCCTACTCCATTACAACTTGAGGAGGATTTGGAGCAGCTTAAAGTCCTTGAAAATGGATATAAGATGAAGGTAATAAAAGTTGACCATGAGGCCCATGGTGTCGACACTCCTGAAGATGTTCAAAAGATAGAATCTCTTATGCGTGAGAGGAATATGTCTTGA 966 0.4358 MSISPSPSSSSSSSSSSSSSSSSSSLESSNNGKTWIINGIVAGIAIAAAVGAHTYLNRFNKFRSRVVGIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLAATLDHVGSQIGNSLVIVVATDDEKIADCCRKFGADVIMTSESCRNGTERCNEALQKLGKKYDVVVNIQGDEPLIEPEIVDGVVRALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNQQFPYLLHLGIQSYDAKFLKIYPHLQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVQKIESLMRERNMS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0578 321 PANTHER BNAA05G35640D PROTEIN 27 321 - -
Lal2g0578 321 MobiDBLite consensus disorder prediction 1 30 - -
Lal2g0578 321 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 27 321 - -
Lal2g0578 321 Pfam Cytidylyltransferase 68 288 IPR003329 -
Lal2g0578 321 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 56 316 IPR029044 -
Lal2g0578 321 SUPERFAMILY Nucleotide-diphospho-sugar transferases 66 319 IPR029044 -
Lal2g0578 321 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 64 316 IPR004528 GO:0008690
Lal2g0578 321 TIGRFAM kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 68 309 IPR004528 GO:0008690
Lal2g0578 321 CDD CMP-KDO-Synthetase 65 314 IPR004528 GO:0008690
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0578 Lal-Chr2 3476374 3480258 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0578 2 3476374 3480258 Lal2g0578 2 3476374 3480258 ECH