Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0539 ATGGAAGAATATCAGAAGCTGTTGTGCGAGTCACTTGGTTTAGGGTTTAGGATTGGATTAGGACGGAGATTCCCGGGTTTGGAGTCAGCAAAGTTTCTGCTTTCATTGATAGAAAATAGTGAGGGCTTTTATATTGGTGTGAAGAAAGTTTATGGTGGAATGATGGAATCAATAGACAGTAGTAAGTGCCCTTCTGTTTGTACAGCTATATCTGCTGTTATTGAAACTGTTGGGACATATTGCAGCTCATTTCTTCACCATAGTATGGACTCCCAGCAGCTTTTCAATTTCTGCATGAGTACTCCAGAAGGACTACCTTACACGTCAGCTTATCCTGCTTTTCCACATTTGCCCAACCAGCTGCTTGAATCCTTGAAAACTGACAAAGGAAACTCACCCAATTCGGCCCTTTCTACTCATTTTGATTCTGATACTCTTTCTGTATTGAGTGACAGCCAAGATCAGCACAACTCTGTGGAAATTCTATCTAGTGCCAGCCCTTCTTGTAACTCTTTGTTGGAAACCAATCATTATTTGCATAGGCCTGCCTCATCTGTGGACCATCTCCGAGACGGTTTGCATGTAGATTGTGCCAGGAGTTCTCTTCCACAGGATGCAAATTGTGACCGTGAAACTAGGCACGCACTGCGGGAACTAGAATCTGTTTTGATGGCACCTGATGGTGATGATGAAGTTACCAGATTGAATACTTCTTTGGGTGATAGCAACAGGCCGTCGACATCTGGTCAAATAAATAGGTCCTGGAGCCTTAAGCGTCCGGGATCTAAATATATTAAAAGTCGTCCTTCTTATGTTCTTAGCAGTAGGCAATCAACTGAAATTCCACGTGTAGAGAAACGTCATAAATCAATGGAGGAAGCATTGCCAGAAGACCTCCCAGCAAACAGTTTGGAACAATTGTTGGTTCAGTGTGCTACAGTCTTGTCAGAAAACAATATGACAGATTTTGATCAATTGATAAGAAAGGCTAGAAGTGCTGTGTCTATTAGTGGAGAACCAATCCAGCGGCTTGGTGCTTATTTGGCAGAAGGGCTTGTTGCAAGGAAGGAGGCATCAGGGAGTAACATCTATCGTGCCCTTAACTGCAAAGAGCCTGAAGGCAAAGATTTACTCTCACACATGCAGATGCTATATGAAATTTGCCCATACTTAAAATTTGGTTACATGGCTGCCAATGGAGCTATTGCTGAAGCATGCAGAAAGGAGGACCGCATTCACATCATAGACTTTCAGATTTCTCAAGGAACTCAATGGGTGACTCTCCTTCAAGCTCTAGCTAAAAGGCCTGGTGGGGCTCCACACGTGAGGATCACGGGGATCGATGATCCTGTTTCTAAATATGCTCGTGGCAATGGACTTGAAGCAGTTGGGAGAAGGCTGGCCATAATCTCTGAGAAATGTGGCATCCCAGTTGAGTTTCATGGTGTGCCTGTTTTAGCTCCAGATGTGACAAGAGACATGCTTGATGTCAGGCCCGGAGAGGCTTTGGCTGTGAACTTCCCTTTGCATCTCCACCATACAGCTGATGAGAGCGTTGATGTAAGCAATCCAAGGGATGGACTTCTGAGATTGGTAAAGTCACTTTCTCCTAAGGTAACCACACTGGTGGAGCAGGAATCAAACACAAATACAACTTCTTTCTTCAGCAGGTTTGCTGAAACACTGGATTATTACTTGGCAATATTTGAGTCCATTGATGTCACTTTCCCTAGAGAGAGCAAGGGTAGGATTAATATGGAGCAGCATTGTCTAGCCCGCGATATTGTGAACATTATTGCTTGTGAAGGGAAGGAGAGGGTAGAGCGACATGAACTGTTCGGCAAGTGGAAATCTCGGTTTACAATGGCCGGCTTTCGCCAATATCCTTTGAGCTCTTATGTGAATTCTGTTATAAGAAGCCTCCTGAGGTGCTATTCAGAGCATTATACGCTGGAGGAGAAGGACGGGACCATGTTTTTGGGATGGAAGAATAGAAATTTGATATCAGCTTCAGCCTGGCATTGA 2025 0.441 MEEYQKLLCESLGLGFRIGLGRRFPGLESAKFLLSLIENSEGFYIGVKKVYGGMMESIDSSKCPSVCTAISAVIETVGTYCSSFLHHSMDSQQLFNFCMSTPEGLPYTSAYPAFPHLPNQLLESLKTDKGNSPNSALSTHFDSDTLSVLSDSQDQHNSVEILSSASPSCNSLLETNHYLHRPASSVDHLRDGLHVDCARSSLPQDANCDRETRHALRELESVLMAPDGDDEVTRLNTSLGDSNRPSTSGQINRSWSLKRPGSKYIKSRPSYVLSSRQSTEIPRVEKRHKSMEEALPEDLPANSLEQLLVQCATVLSENNMTDFDQLIRKARSAVSISGEPIQRLGAYLAEGLVARKEASGSNIYRALNCKEPEGKDLLSHMQMLYEICPYLKFGYMAANGAIAEACRKEDRIHIIDFQISQGTQWVTLLQALAKRPGGAPHVRITGIDDPVSKYARGNGLEAVGRRLAIISEKCGIPVEFHGVPVLAPDVTRDMLDVRPGEALAVNFPLHLHHTADESVDVSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTSFFSRFAETLDYYLAIFESIDVTFPRESKGRINMEQHCLARDIVNIIACEGKERVERHELFGKWKSRFTMAGFRQYPLSSYVNSVIRSLLRCYSEHYTLEEKDGTMFLGWKNRNLISASAWH 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0539 674 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 110 674 - -
Lal2g0539 674 ProSiteProfiles GRAS family profile. 295 674 IPR005202 -
Lal2g0539 674 Pfam GRAS domain family 304 673 IPR005202 -
Lal2g0539 674 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 110 674 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0539 Lal-Chr2 3246987 3250618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0539 213 673 GRAS Transcription Factor Family AT5G48150 55.628 1.86e-172 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal2g0539 GRAS 4.9e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0539 - - gmx:100775665 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0873 8 6352159 6353913 Lal2g0539 2 3246987 3250618 PCT
Lal2g0539 2 3246987 3250618 Lal8g0873 8 6352159 6353913 PCT