Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0602 ATGGCCTCATCTGAGCAGCCTCTAAAGAAACGAAGAATCACCGTCCAACACTCACTTCCTTCTCCTCCTCTTCCATCTCAACCAACGCCCTCACTTCCACCCTCTCCGCCACCAACTCCGCCGCTGTCTCAGGATGAGATCCTCGCCAAGCGGCGGAACAAGGACGAAATCCGAAGCGTGCGGGAGTGTTTAAAGCGAATTAGGTTTATCTTGTCTAAGAAAGATGCTCCTCCCTTCACACCTGACCTTGAACACAGTTATCTCGCTCTCATCACCGCTTCCAGAGTGAAAACACCAAGCGCACTCTCTGTCTTTGATTCATCTGTATCCATGGACCAAGCTATGATGCCCCCGAAGAAGCGAAAATACTACAGACCTTCATTAGAATCATTGCCACCTTTATCGCCACTAGCACGTGAAGAAAGGTCACCCTCTACACAAACCCTAACTCTATTACCAACTAGTTCTTTGGTTGTAGAGGATATCGCCACAGAGTTGCGAAGCGAGGATGAAATTCAAAGCGTTTATAAATGCCTCGAGCATATTAAGTTGTGCTTGTCTCGGAAAGACAAATCTTTTGCGTCTGACCTTGAAAAGAGTTATCTCAATCTCATTGCTGCTTCCAAGGGTTGTGTAAGTGTACAACGTATTGTGGCTGATCTAATTCCTCAATATGCATGTTACTGCCCAACAGCTTTGGAAACTGCAGCTAATGTGATAATTAATATGCTTAACCGGAATTTGGCATTGATTAATGGAGGAGAAGATTCTAATGTTATTGCATTTGCAACTGCTAGAGCCTGTATTTTTGGCCTAGCTGACATCTGCTACGCTGCTTCTTCGGTGGTGCCAACATCTACTGTGATTAAGGGGATTCGCTCTGCTGTTTTTCAGAATGTGCTAGCCTTTTTTATGGCCTTCTTTAAGGGAAAGGATGTTATACAGTTGGTTGACAAGAATTTCTTGAATATTCAAGATTCCCTCGAGGTCTTCTCGGAGTTGAATCAAAAGGTTTTAGATGCAGATGATTGTTCATTGACTAAACTGACAAAATCCTGTGTCTTGTGTCTACTTCGGATTTTCTTCTCTTGTCCAAAAGACTTGCTTGCAGTTTGCATGGAGTTCTTAGTCTCTTCCACAAAAGAAGAAGCTTCCACAGGAAAGCATTTTCTGAGTCTGGTGACTAGCACTTTGGACATTGGTGATGATGATGCAGTTCTACTTTTGGATAGTGCAAATGATGGACCTAAATCAAGTACAGGTTCTACTGGGTCAGACATTAGAGGCGATGAGGGTGGTGAGGAAATCATGACCGATGTCAACCGTGTTTCTGAGAGTAATTCATCAGTTTGCAATAGCTGCTTGCTCATGCTGGTTCTTAACAAGAACTCCTCACTGAGGAAATGGATGTTGCATAGATGTAAGAAATTATTGGACTTGCTTACTAATTCTTCACCTGAAATTTCGTCAGCACTGCAAGGAATTCTTGGAATGATTCCACAGCAAGCAGATTTGGAAGATTGTCAGGTAGACAGCAATGAAGATGAATCTGATTCTTCAACTCACATGAATAGGAATGAACATGAAATTGTTGGCGAATCATCTGGAAAAGTTGGAATTCCAAGATTTCTTGTCGGTTCTTCTACTGGTAGTCTCACAGATAAAGTTTCTGATGCGTATTTGATAGGTCATGGCTCTGCAGTTTCTCCTGATACTATTCCTGTATCAAAAATGGGTTCTCATTTTGACAATGGACTCTCTAAGCCCATAGGGGAGGAAGGGAATATGCCCCACGGTATGTGTTCCACACCTAGAGATTTAGTTGGCCATCAGATATTGTCATCTGGGTTTAGAAAGCCAGTAGATGTTAGGAGTAATTCGTGTGAAGTTAGTGACGATTGCCCAAATGTTGAGAAAAACCAAGCTTTAAATATGAATTTCAATTCACCTCCATTGAGGTCCTCTAGTGGAACTGCTTGTAATATTCTGACATCTCATCATCAGTTTATGTCACCATCTGCACCGAGAAGTCAAATTGCCTGGTGCTATGATGGGGATCCTGCAGCCATGGATATTGTCTCTGCTTCTAAGCAGCTCTGGGTAGGTTATGTAGGGTCTGACATGTCTGAAGGCCATATTAGGTTTCAATTAGAGCGGCTTGGTCCTATTGAACAATATTTTTTCTTCTCTATGAAAGGATTTGCCTTGGTTGAGTATAGAGGGATCATTGATGCAATAAAAGCTCGACACTATTTACCTGGAAATTTTCCATGCTGTGTAAAGTTCATGGATATTGGATTTGGAACTAGGGGTGCTATGAATGGTTTTGCAATTGGCTATAGTTCTCATATTTATGCTGGAAGTATTTCTAGTCAATGGGCTAAGGATGAGATCCTGCATGAGTCATGGAAAGTAATCCGTAAATGTCCTCTCTCAGTTATTGATCTTAGCTGTGAGTGTGCATTACTTATGGAGTTTGAAACTCCTGAAGAAGCTACCTCTGTCATGTTGCATCTGAGACAGCTCAGAAGAGAAAGAAGTAACTATAACCCACATTCTGCTCCAGTAACAGGAAATGTTGGAATTGGGCGTGTTTATTCGGATGGTGCAACACCTGTGCCTGGCCCTCCCCATCTTGAGTTTAAAATCAACAACCAGGTTGCTGGATCACCTCATGCTCGGACTTTGCCTGAGAGACCCGCTGACAGCAGTCACACTAGGATGTCTCAATTGTCTTCTTTAGTAGCATCATTGTGTACAAAGTATAATATTAATCAAAACATAGGTCTCCACAATAACTATATGACTGGACATAGTTGTGCTTCTTCCATGCCTGGGGAAGATACAGTTCCGTCCAGCACTCTATGGATAACTATTCCAGGTAGTGGCTCTATGATTCTCATGGATGATGAGCTAATGGCCATTTGCAACCTTGCTGTCGGTAACTCTGGCTCAATAGTGAGGTTGACACAAGCAAACATGCAGATGGGATGTGGTTGGTTTGTTGAATGCAGTAATGTTGATGGTGCAGTTTCTGTTCTCAAGAATCTTCGTGCTTGTCCAGCGTCGTTCTTCCAGATTGAATTCAGCAAACCTGGAAATCAGAATGCTCTTCCATTTCCAATTATACCAGAGAAAAACTCTATGGAGAACGTACATGGTGCACCTATGTCTCAGTCAAACTGGCACTTTCCAGGTTCGAGGGAGATTTCAGAAGTTGGAGCAAGGAAGCCTGATAGTTATGATAGTTTATCAATGGATCCTCAACAAGGAGGTGGTGTTGCACATTCACTCTCTGTGACACAAGGACCTTCCGTTCCACCACCACAACAAATTCAGTCCTCTACATTCATTCGCCCTGTTTATGGTCCTCCAAATGGTCCATGGGATTCACAGGGAATGAATAATCAATTACCTGTCAGCCAATTCGGGACAGGAGTAATGCCAAACAATTTTCATGGTAGTTCTGTTACAAGTCCTTTCATACCTGCATCAGTAACTCCACTTGCTCAGATACAGGGAACTCCAATGCAGCCTTATAACCAGCTTATTCCTCGACCGATTATACCACCACCTTTATCATCTTTGCCACATCCTCAGCCTGAAATGCCGCCTCCGTTTCCTTCTTCTCCGCCACCTTTACCCCAGACACAGCCACCCTTGGTTCCTCCACCACCTCCACCACCATTACCTGTCCAAGAATCAATCAATATTGAATGTTCAAGTCAGTCTATGCAGTATCAATGGCAGGGGAGTCTCTGTAAGAGTGGGGTTAACTACTGTACAATTTATGCATGTCGAGCAGACTCAAATATCTGCAGATACTCAAATGACATACCTGAGCCTGCTGAGTGGCCCACAAAATTAGACATGACTAAACGCACAGATTTTCAACATGTGAAATCAACATTTGCTGTTACTCCACATAATAGAAGAGAAGTGTGCCGTTTGATACCATCTTCCACAAGTGATCACAGAAGGTTTCAGGATTTCATATCATACTTAAAGCAGAGGGATTGTGCTGGAGTTATTAAAATCCCAGCATCAAAATTCCTATGGCCAAGGCTGCTATTCATACTCCCTCACTCTCTTGAAACATGCTCTTTGCTTTCTATTGCACCTGATCCATCTGATTGTCTCATTGCTTTGGTTCTGCCCAAAGACACAAACTTTGAGTGGATGTGA 4185 0.4284 MASSEQPLKKRRITVQHSLPSPPLPSQPTPSLPPSPPPTPPLSQDEILAKRRNKDEIRSVRECLKRIRFILSKKDAPPFTPDLEHSYLALITASRVKTPSALSVFDSSVSMDQAMMPPKKRKYYRPSLESLPPLSPLAREERSPSTQTLTLLPTSSLVVEDIATELRSEDEIQSVYKCLEHIKLCLSRKDKSFASDLEKSYLNLIAASKGCVSVQRIVADLIPQYACYCPTALETAANVIINMLNRNLALINGGEDSNVIAFATARACIFGLADICYAASSVVPTSTVIKGIRSAVFQNVLAFFMAFFKGKDVIQLVDKNFLNIQDSLEVFSELNQKVLDADDCSLTKLTKSCVLCLLRIFFSCPKDLLAVCMEFLVSSTKEEASTGKHFLSLVTSTLDIGDDDAVLLLDSANDGPKSSTGSTGSDIRGDEGGEEIMTDVNRVSESNSSVCNSCLLMLVLNKNSSLRKWMLHRCKKLLDLLTNSSPEISSALQGILGMIPQQADLEDCQVDSNEDESDSSTHMNRNEHEIVGESSGKVGIPRFLVGSSTGSLTDKVSDAYLIGHGSAVSPDTIPVSKMGSHFDNGLSKPIGEEGNMPHGMCSTPRDLVGHQILSSGFRKPVDVRSNSCEVSDDCPNVEKNQALNMNFNSPPLRSSSGTACNILTSHHQFMSPSAPRSQIAWCYDGDPAAMDIVSASKQLWVGYVGSDMSEGHIRFQLERLGPIEQYFFFSMKGFALVEYRGIIDAIKARHYLPGNFPCCVKFMDIGFGTRGAMNGFAIGYSSHIYAGSISSQWAKDEILHESWKVIRKCPLSVIDLSCECALLMEFETPEEATSVMLHLRQLRRERSNYNPHSAPVTGNVGIGRVYSDGATPVPGPPHLEFKINNQVAGSPHARTLPERPADSSHTRMSQLSSLVASLCTKYNINQNIGLHNNYMTGHSCASSMPGEDTVPSSTLWITIPGSGSMILMDDELMAICNLAVGNSGSIVRLTQANMQMGCGWFVECSNVDGAVSVLKNLRACPASFFQIEFSKPGNQNALPFPIIPEKNSMENVHGAPMSQSNWHFPGSREISEVGARKPDSYDSLSMDPQQGGGVAHSLSVTQGPSVPPPQQIQSSTFIRPVYGPPNGPWDSQGMNNQLPVSQFGTGVMPNNFHGSSVTSPFIPASVTPLAQIQGTPMQPYNQLIPRPIIPPPLSSLPHPQPEMPPPFPSSPPPLPQTQPPLVPPPPPPPLPVQESINIECSSQSMQYQWQGSLCKSGVNYCTIYACRADSNICRYSNDIPEPAEWPTKLDMTKRTDFQHVKSTFAVTPHNRREVCRLIPSSTSDHRRFQDFISYLKQRDCAGVIKIPASKFLWPRLLFILPHSLETCSLLSIAPDPSDCLIALVLPKDTNFEWM 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0602 1394 MobiDBLite consensus disorder prediction 1083 1111 - -
Lal25g0602 1394 PANTHER NUCLEIC ACID BINDING PROTEIN 111 1394 - -
Lal25g0602 1394 PANTHER NUCLEIC ACID BINDING PROTEIN 1 95 - -
Lal25g0602 1394 SUPERFAMILY RNA-binding domain, RBD 686 756 IPR035979 GO:0003676
Lal25g0602 1394 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 1 95 - -
Lal25g0602 1394 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 111 1394 - -
Lal25g0602 1394 Pfam SPOC domain 1242 1385 IPR012921 -
Lal25g0602 1394 MobiDBLite consensus disorder prediction 21 43 - -
Lal25g0602 1394 MobiDBLite consensus disorder prediction 1077 1111 - -
Lal25g0602 1394 Gene3D - 688 773 IPR012677 -
Lal25g0602 1394 MobiDBLite consensus disorder prediction 1 45 - -
Lal25g0602 1394 MobiDBLite consensus disorder prediction 1185 1228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0602 Lal-Chr25 4536622 4554896 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0602 25 4536622 4554896 Lal10g0779 10 15513261 15520741 LSH