Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0599 ATGGACCCATCTATTGTGAAGCTTCTTGAAGATGATGAGGATGAAACAATGCATTCAGGTGTGGATTTGGAAGCCTTCCAGGCTGCCTTAAATAGAGATATCGGAGGAGATGCGTCTGCTTCTCAGCCGTCTGGTTCAGACACTGTTTTGTCTCAAGGAAGCAATAATACATTCAGTCAGGCAACACAACAGTGGCCAACTTCCACCCTTGAGAAACGAGTTGACAGTCAAAGTCAAGAGGCTAAAACTGCACAGCAGCAAGAGCAACCTTCATCTGAGGTGGAGCTGAAGCAACATGCATCTCTTATGGAACAACCACAGCATGTTGCTTCTCAGGTTGTTAATAATCCTCCTTTTTCACAAAAACAATCTCAAGATGAATTTCACCAATCACAGAATGTACAAGTTTCTGTCCAAAATTCTCAAATGATTGGAATTCAAAGTTCTGGAAAAGATCATGTCCATAATCATGAGGTAGTCCAAACACATAACCCAAGTAATGAATCTCAGTATGCGAAGTTGCAGCAGATCAGTAACCAACAGGATAGCTTCACTGAGCAGCCAAGCAGCCAAATGAACCGTACTAATAGACAAGTACCATTTGCTGTGTTGCTACCCATCTTGATTCCCCAGCTTCCCAAAGACAGAGCCATGCAACTTCAAACTCTATTTACTAAATTGAAGAAAGATGAAATTCCGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATTGTAGGGGACCAGATGCTTAGATTAGCATTAATAAAAGTGCAACAGACAAGGCCCAACCAAGGACCTTCTGGGCAGCAACCTGCTTTAGGGATGCCAGCTGTAGGTTCAGGTGCAAGACAATTTAATGATCCACATGCTTTAGCACAGCTGCACCAGAGAAGTATGATTGCGGCTGCAGATCAATCTCGTATGACTTCTCCGGCTGTCCAGAATGTGGGGAGCAATGCTAGAAATTCTCAGGAATTGGATGCTAAAATAGAATCTCAAGGATCACAAACAAGCCAGTTACCACCTTCCAGTTCCAACGTTGTTAGTCAAGAAACAGAAAGATCGTCAGTTCACATACAAGGGCTTACTAAGCAGCAACAACAACATCTACATTTCTCTTCTGCACATGGAAGTAGTGGTGGTAATTATAACCCCTTTTCTGGGACAACCAGTACTTCCATTTCATCTATCAACCCACAACTGCTTGATTCACACTTGGGTCAAACTTCACATCAAAACACTGGTCAAAATCCGTTAGGTGGGGCTACACAAGGTTTGAATGTCATCGGTATGCCAAAACTTCAACAGCAGAATTCTTTCAGTGGCCCCAAGAGGCTACCTGGTGGATCTCTGTCTTCCGTGGTAAATAATTCAGCACCCCAGCAAACTTCCGATGCTGGGCAACCATCAATAAACAAAGAACAAAAGGTGGGCATGTTGTCATCGGTTTCTTATGTGAAAAAGGAACCTAGTGACCTGTCTACTGAGCAGCAGCATAGGCTTAATTTGTCTAAATTGCATGGCTTGCATTCTGTTAATTCTGCTCAGATTGAACAAGGTCGTGCTAATCACGGAATTGTAAAGGTTGAGTTTTCAAGAGGTCTTCCAGCCTTCACAAACATGCCACCGACAACATTCTCACACAATTCTTCTGCTTTCCCGTCTGTAATGACCCAACCAGACCCTAGTGTCTCTATCCCATCAAACACTTCTGGGATTATGGCAAGGACATCTTTGAAAAAGCCTTCTCCTGCCCAGAAGAAACCGCTTGAAGCACTTGGTTCCTCACCTCCTCCTCCAAGTAAGAAACAAAAAACATCTGGGGGATCTGTAGAACAAAGCATTGAGCAGCTTAATGATGTCACCGCTGTTAGTGGAGTTGATCTCAGGGAAGAGGAAGAGCAGTTATTTTCTGGGCCCAAGGAGGACAGTCGAGTTTCAGAAGCATCTCGAAGAGCTGTGCAAGAAGAAGAGGAAAAGCTGATTTTTCAGAGAACTCATTTGAATAAAAAATTGGTTGAGATTTTGGTCAAGTATGGCTTGAAGGGTATTGGCAATGATGTAGAGAGATGCTTATCACAGTGCGTGGAAGAAAGAATGCGTGGACTAATAAGTAACCTGATTAGACTGTCAAAACAGCGGGTTGATTTTGAGAAGACAAGACACCGGACTGTTGTCACCTCAGATGTTCGGCAGCAAATCATGATAGTAAATAGAAAACTAAGGGAAGAGTGGGATAAAAAACAGGCAGAAGAAGAGAAGCTTCGAAAAATTAATGATGTCGAGAACAATACTGGAGTTGATGGTGACAAGGAGAAGGATGAAGGTCGTACTAAATTAACAAAGGTGAACAAGGAAGAGGATGAAAAGATGAGGACAAATGCTGCAAATGTTGCTGCCCGCGCTGCTGTTGGGGGAGATGACATGCTGTCAAAGTGGCAACTTATGGCTGAGCAAGCCAAGCAGAAACGTGAAGGGGGGACGGACCTGTCATCTGGTTCTCAAACAGCTAAAGATATGAACCGCAAATCTTCATCAGCATTTGGAAGAAGTATGAATGATAATCAAGAAGGAGATAAAAAAGGTCCAACTATAACATCTTCAGGGGCTGCTAGAAAACATGGCAAAAATCATGCTCTCGCATTTCAAACTCGGGTAGCTCGAAGCATCTCTGTCAAGGATGTAATTGGAGTCCTGGAGAGGGAACCCCAGATGTCCAAATCACCACTCATACATCGCTTGTATGAGAAAATTCATTCTGATGCCCCAGCTGAACAAGGATAA 2784 0.4328 MDPSIVKLLEDDEDETMHSGVDLEAFQAALNRDIGGDASASQPSGSDTVLSQGSNNTFSQATQQWPTSTLEKRVDSQSQEAKTAQQQEQPSSEVELKQHASLMEQPQHVASQVVNNPPFSQKQSQDEFHQSQNVQVSVQNSQMIGIQSSGKDHVHNHEVVQTHNPSNESQYAKLQQISNQQDSFTEQPSSQMNRTNRQVPFAVLLPILIPQLPKDRAMQLQTLFTKLKKDEIPKDSFVRLMKGIVGDQMLRLALIKVQQTRPNQGPSGQQPALGMPAVGSGARQFNDPHALAQLHQRSMIAAADQSRMTSPAVQNVGSNARNSQELDAKIESQGSQTSQLPPSSSNVVSQETERSSVHIQGLTKQQQQHLHFSSAHGSSGGNYNPFSGTTSTSISSINPQLLDSHLGQTSHQNTGQNPLGGATQGLNVIGMPKLQQQNSFSGPKRLPGGSLSSVVNNSAPQQTSDAGQPSINKEQKVGMLSSVSYVKKEPSDLSTEQQHRLNLSKLHGLHSVNSAQIEQGRANHGIVKVEFSRGLPAFTNMPPTTFSHNSSAFPSVMTQPDPSVSIPSNTSGIMARTSLKKPSPAQKKPLEALGSSPPPPSKKQKTSGGSVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRRAVQEEEEKLIFQRTHLNKKLVEILVKYGLKGIGNDVERCLSQCVEERMRGLISNLIRLSKQRVDFEKTRHRTVVTSDVRQQIMIVNRKLREEWDKKQAEEEKLRKINDVENNTGVDGDKEKDEGRTKLTKVNKEEDEKMRTNAANVAARAAVGGDDMLSKWQLMAEQAKQKREGGTDLSSGSQTAKDMNRKSSSAFGRSMNDNQEGDKKGPTITSSGAARKHGKNHALAFQTRVARSISVKDVIGVLEREPQMSKSPLIHRLYEKIHSDAPAEQG 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0599 927 MobiDBLite consensus disorder prediction 34 98 - -
Lal25g0599 927 MobiDBLite consensus disorder prediction 37 98 - -
Lal25g0599 927 MobiDBLite consensus disorder prediction 302 471 - -
Lal25g0599 927 ProSiteProfiles RST domain profile. 192 263 IPR022003 -
Lal25g0599 927 MobiDBLite consensus disorder prediction 826 863 - -
Lal25g0599 927 MobiDBLite consensus disorder prediction 166 191 - -
Lal25g0599 927 Pfam RCD1-SRO-TAF4 (RST) plant domain 195 259 IPR022003 -
Lal25g0599 927 MobiDBLite consensus disorder prediction 550 577 - -
Lal25g0599 927 Coils Coil 67 87 - -
Lal25g0599 927 CDD TAF4 613 913 IPR007900 GO:0005669|GO:0006352
Lal25g0599 927 MobiDBLite consensus disorder prediction 817 879 - -
Lal25g0599 927 Pfam Transcription initiation factor TFIID component TAF4 family 618 913 IPR007900 GO:0005669|GO:0006352
Lal25g0599 927 MobiDBLite consensus disorder prediction 550 613 - -
Lal25g0599 927 PANTHER IP01149P-RELATED 39 919 - -
Lal25g0599 927 MobiDBLite consensus disorder prediction 756 791 - -
Lal25g0599 927 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 39 919 IPR045144 GO:0005669|GO:0006352
Lal25g0599 927 MobiDBLite consensus disorder prediction 599 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0599 Lal-Chr25 4523596 4531092 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0666 8 4693819 4699921 Lal25g0599 25 4523596 4531092 LSH