Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0596 ATGACGTGGCCTTATCGCAGCCGTCTAATTCATCAAAATAAAATATCCACAATTATTTTGTTTGAATCTTCTCTAATCAACTTTTTCTTCTCATTCTCATCTGCATCTCGCAACAAAGCCATCGTCGTTTTCTTCTCCTTATCGCAGAATTTAGATTGTTATGCTGTTGTTCTGAATTTTGTGAACACTACATTGGATTGGGTGAAATTCGCTTTAGATGCTCCTTCTGCACGAGCTGTAGTTTTTGGATTTCATATCGGTGGACATTTATTCGTGGAAGTTCTTCTCTTGGTGGTCATCCTTTTCTTGCTTTCGCAGAAAAGTTACAAGCCTCCTAAACGGCCCTTAACAAACAAGGAAATAGACGAGCTATGTGATGATTGGGTTCCAGAACCCCTTATTCCTTCTCTTAATGAAGAGATGCAGTATGAACCACCAGTGCTAGAGAGTGCTGCTGGGCCACATACCATAATTGGTGGTAAAGAAGTTGTCAACTTTGCTTCAGCAAACTATCTTGGGTTGATAGGTCATCAAAAGTTACTTGACTCATGTTCTTCTGCTTTAGAGAAATATGGTGTTGGTTCTTGTGGGCCCCGTGGGTTTTATGGAACAATTGATGTCCATCTTGACTGCGAAGCAAGAATAGCAAATTTTTTGGGAACCCCTGATTCAATTCTCTACTCCTATGGACTTTCCACCATGTTCAGTGTGATTCCTGCATTCTCCAAAAAAGGAGATATAATTGCAGCGGATGAGGGAGTCCACTGGGGAATACAGAATGGCCTTTATCTCTCAAGAAGCACTGTGGTGTATTTTAAGCATAATGATATGGACTCTTTAAGAAATACTTTAGAGAATATTAGTTCCAAAAATAAGAGGATCAAGAAATTGAGGCGTTATATTGTTGTTGAAGCTGTCTACCAGAATTCTGGTCAAATAGCACCTTTAGATGAGATCATTAGGTTGAAGGAAAAATATCGTTTTCGTGTTTTGCTGGACGAGAGCAACTCATTTGGTGTGCTTGGAATTTCTGGAAGAGGTCTCACTGAACACTATGGAGTTCCAGCTGAGAAGTTAGATATTATAACTGCTGCTATGGGACACGCATTGGCCTCAGAAGGAGGATTCTGCACTGGAAGTGCTAGAGTCATAGATCACCAACGATTGAGTAGTTCTGGATATGTCTTTTCTGCTTCTCTGCCTCCATATCTTGCTAGTACAGCAATCACAGCTATTGACATCCTGGAGGAAAATCCTTATCTGATAACAAAGCTGAAGAACAACATTGCGGCGTTATGGAGAGGACTGTCAAACATAACAGGCTTCACAATTGCAAGTAATCCAGAGTCACCAATTGTTTTGAAAGAAGATTCTATATTTGTGGTGCCTTCAAAAAGATCAACCTTGGACAATTGTCGTTTACCTTTAGGAATTAGATTGTTTGTTTCTGCAGGGCATTCAGAATCTGATCTTCACATGGCTTCTGAATCATTGAAAAGGATTGCAGCATTAGTCCTTGGGAGAGGGCTTTCTTAA 1536 0.4017 MTWPYRSRLIHQNKISTIILFESSLINFFFSFSSASRNKAIVVFFSLSQNLDCYAVVLNFVNTTLDWVKFALDAPSARAVVFGFHIGGHLFVEVLLLVVILFLLSQKSYKPPKRPLTNKEIDELCDDWVPEPLIPSLNEEMQYEPPVLESAAGPHTIIGGKEVVNFASANYLGLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEARIANFLGTPDSILYSYGLSTMFSVIPAFSKKGDIIAADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLENISSKNKRIKKLRRYIVVEAVYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSFGVLGISGRGLTEHYGVPAEKLDIITAAMGHALASEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASTAITAIDILEENPYLITKLKNNIAALWRGLSNITGFTIASNPESPIVLKEDSIFVVPSKRSTLDNCRLPLGIRLFVSAGHSESDLHMASESLKRIAALVLGRGLS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0596 511 Gene3D Aspartate Aminotransferase, domain 1 156 453 IPR015422 GO:0003824
Lal25g0596 511 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 453 506 - -
Lal25g0596 511 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 54 454 - -
Lal25g0596 511 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 54 454 - -
Lal25g0596 511 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 453 506 - -
Lal25g0596 511 SUPERFAMILY PLP-dependent transferases 135 501 IPR015424 -
Lal25g0596 511 Coils Coil 277 297 - -
Lal25g0596 511 Gene3D - 177 418 IPR015421 GO:0003824
Lal25g0596 511 Pfam Aminotransferase class I and II 162 452 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0596 Lal-Chr25 4495616 4503725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0596 57 387 Acyl Lipid Metabolism Gene Families AT4G36480 77.341 0.0 553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0646 8 4545918 4553511 Lal25g0596 25 4495616 4503725 LSH
Lal25g0596 25 4495616 4503725 Lal10g0826 10 15896309 15903778 LSH