Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0578 ATGCCGGAGTTGGTGTTTCAACAACAACAACAACGCAGTAACCGTTCTTTGAGGCCAACATTTTCAACAAGACCTCGCGACCGTGAATCCAGCCCTGACTCCGTTATCTGCACTCTCGAATCCAATCTCAGCCTCTTCTCCTCCGCTTCCGCCAGCGTCGACCGTTGCTCCTTCGCTTCCGACGCTCACGACGATCACGACTCTCTCTCCTCCCAAATCTCACTGCATTTGGCAGCACAAAACGAGAACTGGAGCGGTTCAGATCCAGATCCGAGTCATGAAAAACGACATGCACAATGTAACAACAAGCATCAAACTCGGTTATGCAGAAAAGGAGAAAAAGTAAAAGGCATGTTATTACAGCATGTACACTTCATTTTTGTTGTTGTTGAAAAAGTGAAAGAAATTCAGAAAGAAGATAACGATTGTGACACTGAAGAAGATGGAAATCAAATCTTGGATTTCGATTCAGCCAGAAACTCTTTCTCTCTAGCTCTAAAAGAATGTCAGGATAGGAGATCAAGATCTGAAGCTTTGATCAATAAGCAGGATCTGCGAATGCCTGCTTCATTAGATCTGAACAATGCAATTGCTACAGGGTCTTCGCCTCACTTGGGAGCCATGAAAAAGAGCTCAGTTTTGCCTCGAAGGTCTGGTAGTGGTAATTTCATGAGCCCAGGAACGCCAAATTATCGTCAAGCTGGTGTTGCTATGCATAAAGGTTGGAGCTCGGAGCGAGTTCCTTCCCATACCAATGCTGCTCGCAAGCAGGTTGGCACGGCATTGTTGCCTCTCAGCAATGGAAGAACATTGCCATCTAAATGGGAAGATGCTGAGAGATGGATTCTTAGCCCTGTTTCAGGAGATGGCACTGGAAGAGCTTCACTTCCGCCGCCACAGAGGAGGCCAAAGTCAAAGAGTGGTCCACTTGGGCCCCCGGGTGTTGCTTATTATTCGTTGTTTTCACCAGCAGGGCCAATGTTTGAAGGTGGGAATGGGGGGAATTTTATGGCAGCTTCTCCATTTTCAGCTGGTGTTAAATCAGCTGATGGATTTACAATCAACTCCAGTAGCCACCGCCCCTTGAGATCAGATCCTTGCATGGCCCGCTCAGTCAGTGTCCATGGATGCTCTGAGATGCAGAGTCAGTCATCAATGCCTGCCCAAGAGGAGGAGTTTGATGGTTTCAAAGATGCTGGCACTGATGTATTCCCTGCTGTTTCAAGGAGAGACATGGCAACACAGATGAGCCCAGAGGGCAGTTCATGCTCCTCTCCCAATATGAGGCCTTCTTTCTCTGCCTCCACTCCACCTCCCCTGCCTATCACAGAATTTCAGAGTGCCTCTTTATCTAAAATGGATATCAGAGACGTGCAGGTAGATGAACGCGTCACCATGACAAGGTGGTCCAAGAAACACAAGGCCCTGTTCTCTGGCAGAGGCTCAGAAAATGTTGACAGTTGGAAAAAGAAAGAAAGAAGTACTCAATCTTCATCGGACAATTCTGAAAGGTCAAAGACTGTTTCGAAGGTTAACAGGGAGGAAGCCAAAATCACTGCATGGGAGAACTTGCAAAAGTCAAAAGCTGAGGCAGCAATACGAAAACTAGAGATGAAGTTGGAAAAGAAGCGAGCATCTTCTATGGATAAGATTATGAAAAGGTTGAGATTGGCTCATAAAAAAGCTCATGACATGCGGAGTTCAGTTTTAGCTAACCAGGTCAATCAAGTTACAAGAATGGACCACAGGGCATTATCATTTCGTCGAACCAGCCAGATGGGTTCTTTGAGTGGTTGTTTCACCTGTCATGTCTTTTAG 1818 0.4637 MPELVFQQQQQRSNRSLRPTFSTRPRDRESSPDSVICTLESNLSLFSSASASVDRCSFASDAHDDHDSLSSQISLHLAAQNENWSGSDPDPSHEKRHAQCNNKHQTRLCRKGEKVKGMLLQHVHFIFVVVEKVKEIQKEDNDCDTEEDGNQILDFDSARNSFSLALKECQDRRSRSEALINKQDLRMPASLDLNNAIATGSSPHLGAMKKSSVLPRRSGSGNFMSPGTPNYRQAGVAMHKGWSSERVPSHTNAARKQVGTALLPLSNGRTLPSKWEDAERWILSPVSGDGTGRASLPPPQRRPKSKSGPLGPPGVAYYSLFSPAGPMFEGGNGGNFMAASPFSAGVKSADGFTINSSSHRPLRSDPCMARSVSVHGCSEMQSQSSMPAQEEEFDGFKDAGTDVFPAVSRRDMATQMSPEGSSCSSPNMRPSFSASTPPPLPITEFQSASLSKMDIRDVQVDERVTMTRWSKKHKALFSGRGSENVDSWKKKERSTQSSSDNSERSKTVSKVNREEAKITAWENLQKSKAEAAIRKLEMKLEKKRASSMDKIMKRLRLAHKKAHDMRSSVLANQVNQVTRMDHRALSFRRTSQMGSLSGCFTCHVF 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0578 605 Pfam Remorin, C-terminal region 500 593 IPR005516 -
Lal25g0578 605 MobiDBLite consensus disorder prediction 1 20 - -
Lal25g0578 605 MobiDBLite consensus disorder prediction 480 512 - -
Lal25g0578 605 PANTHER REMORIN FAMILY PROTEIN 114 603 - -
Lal25g0578 605 MobiDBLite consensus disorder prediction 414 448 - -
Lal25g0578 605 MobiDBLite consensus disorder prediction 215 229 - -
Lal25g0578 605 MobiDBLite consensus disorder prediction 82 103 - -
Lal25g0578 605 MobiDBLite consensus disorder prediction 88 103 - -
Lal25g0578 605 Coils Coil 526 546 - -
Lal25g0578 605 MobiDBLite consensus disorder prediction 414 431 - -
Lal25g0578 605 MobiDBLite consensus disorder prediction 202 232 - -
Lal25g0578 605 PANTHER OS02G0116800 PROTEIN 114 603 - -
Lal25g0578 605 MobiDBLite consensus disorder prediction 480 499 - -
Lal25g0578 605 MobiDBLite consensus disorder prediction 284 312 - -
Lal25g0578 605 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0578 Lal-Chr25 4333299 4339424 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0578 25 4333299 4339424 Lal25g0578 25 4333299 4339424 ECH
Lal8g0637 8 4436725 4444390 Lal25g0578 25 4333299 4339424 LSH
Lal25g0578 25 4333299 4339424 Lal10g0818 10 15849426 15853848 LSH