Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0570 ATGGCATTCAATGACTTCTTCGCCGGCGAAATCACCACCGAGCTTGTAAAGATGCTAATAAGCATTTCTCGCAAGTCCCTTCTATGCAGATCAAGTGCTCAACAAATCATAACTTATATAAATGAACTACTACCTATTATAGATGAAATCAAATATTCCGGTGTTGAACTCTCCGAGCACCGCCAGTTTCAGCTTAACCGCGTATCCGAGGTGCTGCGCTCCGGTGTTGACCTATCACGCAAGGTCCTTTCCTCAAGCCGTTGGAACGTGTATAAGAACTTGCAGCTTGCTAAAAAGATGGAGAAACTTGAGAAGAACGTCTCAAATTTCATGCAGGGTCCCATGCAGGCTCATATATTAGCTGATGTGCACCATACTCGGTTCGAAATGGCCAAAGGATTCGATCAAGTTGAGGCGTATAACCGGAAGTTGGAGTGTTACTTTGGTGCCATGAAGATTGGAGTTGGAGGAGGAGGGTGGGTGGAAGAGGCTGTGAGGAGCATGGAGGAAGATGAGAGTTGTTGGGGTGAGGGTAATTCTGGGAATTTTGGGGTGGCTTTAGAATTGGGGAAGAAGAAAGTTAAGGATATGATTGTTGGAAGAGAGGATCTTAAGGTTGTTGGGATTCGCGGAATTGGTGGATCTGGGAAAACCACTCTTGCGAGAGAGCTCTGCAGAGATGATCAAGTTCAAAGTTATTTCAAAAAGAGGATATTGATCCTGACTGTGTCACAATCCCCGAATGTCGAGCAGATAAGAACAAAAATATGGGGTTTTATTATGGGAAATCAAAGCTTGAATGCCAATTATGTCGTACCGCAATGGATGCCACAAATTGAATGCAGAAACGAAGCACCTCGACGCCTTATAGTTCTAGATGATGTTTGGTCTCTTTCTGTCTTGGGACAGCTTTTGTATAAAAGTCCAGGTTGCAAATATGTTGTGGTATCAAGAGAAAGATTTCAAACAATTTGTGATGCCACATATGAAGTGGAATTGTTGAATGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATACCTTTAGCTGCTAATGAGAATTTGGTCAAGCAGTTTTCACTTTACTCGCCGGATTTTGTATCCATGACAAAACAGGTTGTGACTGAGTGTGGAAGGCTTCCACTGGCTCTAAAAGTGATAGGAGCTTCTTTGAGGGATCAGACTGAAATGTTTTGGTTAAGTGTTAAAAATAGGCTATCTCAAGGCAAAAGCATTGGGGAATCATATGAAATCAATTTGATTCATAGAATGGAATTTAGCACCAATTACCTACCTGAAAAGATAAAGGAGTGTTTCTTGGACTTGTGTTCGTTTCCCGAGGATAAGAAGATTCCTCTAGAGGTTATCACTAATATGTGGATTGAAATACATGATATTGATGAAACAGAAGCATTTGCTATTGTTGTTGAGCTCTCAAACAAGAATCTTCTGACCTTGGTGAAAGAGACACGTGCTGGAGGAATGTATAGCAGCTGCTTTGAGATCTCAGTTACTCAACATGATATACTAAGAGACCTTGCTCTTAATATGAGCAATCGTGGAAACATCCGTGAACGCCGACGATTAGTTATGCCAAAACGAGAAGAACATGGAAGACTCCCTAAAGAATGGTTGAGAAACATGGGAATGCCATTTGAGGCTCAAATAGTTTCAATTCACACAGGTGAAATGAAAGAAGAGGACTGGTGTAAACTAGAATTTCCTAAAGCTGAAGTGCTGATTATTAACTTCACATCTAATGAATACTTTCTACCACCCTTCATTGATAGAATGCCAAATTTGAGGGCATTAATAGTAATAAACTATAGTGCCTCATATGCAAGCCTTCACAATGTTTCAGTGTTTAACAATTTGGCTAACTTGAGGAGCCTGTGGCTTGAAAAAGTTTCCACACCTAAGTTATCAGGTCTTGTATTAAAAAACTTAGGCAAATTATTCATAGTCCTATGCAAGGTAAATAACAATTTGGAAGGGAAAGAGGCAAATATGGCTCAAACTTTCCCCAATCTCTCTGAACTCACTCTTGATCATTGCGACGATGTAACCGAACTTCCCTCGAGCATTTGCGAAATCAAGTCACTTCAGAACTTGAGTCTCACCAACTGCCACAGTTTGAATCAACTTCCTAGTGAATTAGGAAGACTAAAATCTCTAGCAATCCTCCGGCTATTAGCTTGCCCGGATTTGAAAACACTTCCTCCTAGCATTTGTAACATGATTAGGCTGAAGTATATCGATATTTCACAGTGTGTTACACTTGCATGCTTCCCTGAGGAGATTGGTAAGTTAGTAAACTTGGAAAAGATTGATATGAGGGAATGTTCCATGATGAGGAATTTACCAAAGTCTGCAATGTCAATGAAGTCCTTAAGGCTTGTAATTTGTGATGAAGAAGTATCTGGAATGTGGAAAAATGTTGAGAAGGCTAAACCAGATTTTCATATTCAAGTATCAGAGCAGTCCTATGATCTAGACTGGCTTAAAGAGTGA 2529 0.4053 MAFNDFFAGEITTELVKMLISISRKSLLCRSSAQQIITYINELLPIIDEIKYSGVELSEHRQFQLNRVSEVLRSGVDLSRKVLSSSRWNVYKNLQLAKKMEKLEKNVSNFMQGPMQAHILADVHHTRFEMAKGFDQVEAYNRKLECYFGAMKIGVGGGGWVEEAVRSMEEDESCWGEGNSGNFGVALELGKKKVKDMIVGREDLKVVGIRGIGGSGKTTLARELCRDDQVQSYFKKRILILTVSQSPNVEQIRTKIWGFIMGNQSLNANYVVPQWMPQIECRNEAPRRLIVLDDVWSLSVLGQLLYKSPGCKYVVVSRERFQTICDATYEVELLNEEDALSLFCHHAFGQKSIPLAANENLVKQFSLYSPDFVSMTKQVVTECGRLPLALKVIGASLRDQTEMFWLSVKNRLSQGKSIGESYEINLIHRMEFSTNYLPEKIKECFLDLCSFPEDKKIPLEVITNMWIEIHDIDETEAFAIVVELSNKNLLTLVKETRAGGMYSSCFEISVTQHDILRDLALNMSNRGNIRERRRLVMPKREEHGRLPKEWLRNMGMPFEAQIVSIHTGEMKEEDWCKLEFPKAEVLIINFTSNEYFLPPFIDRMPNLRALIVINYSASYASLHNVSVFNNLANLRSLWLEKVSTPKLSGLVLKNLGKLFIVLCKVNNNLEGKEANMAQTFPNLSELTLDHCDDVTELPSSICEIKSLQNLSLTNCHSLNQLPSELGRLKSLAILRLLACPDLKTLPPSICNMIRLKYIDISQCVTLACFPEEIGKLVNLEKIDMRECSMMRNLPKSAMSMKSLRLVICDEEVSGMWKNVEKAKPDFHIQVSEQSYDLDWLKE 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0570 842 PRINTS Disease resistance protein signature 206 221 - -
Lal25g0570 842 PRINTS Disease resistance protein signature 282 296 - -
Lal25g0570 842 PRINTS Disease resistance protein signature 383 397 - -
Lal25g0570 842 PRINTS Disease resistance protein signature 702 718 - -
Lal25g0570 842 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 839 IPR044974 GO:0006952
Lal25g0570 842 Pfam NB-ARC domain 192 425 IPR002182 GO:0043531
Lal25g0570 842 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 10 132 IPR008808 -
Lal25g0570 842 Gene3D - 432 519 IPR036388 -
Lal25g0570 842 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Lal25g0570 842 SUPERFAMILY RNI-like 595 804 - -
Lal25g0570 842 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 7 839 - -
Lal25g0570 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 448 IPR027417 -
Lal25g0570 842 Gene3D Ribonuclease Inhibitor 564 825 IPR032675 -
Lal25g0570 842 Gene3D - 185 329 IPR027417 -
Lal25g0570 842 Gene3D - 333 431 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0570 Lal-Chr25 4247113 4251075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0570 666 814 Receptor kinase-like Gene Family AT4G08850 26.667 7.51e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0570 25 4247113 4251075 Lal25g0570 25 4247113 4251075 ECH