Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0563 ATGGAGTTAATGGTGCGGTGTACGCTTTCCAGATTTGGTTTTAAGCTTCGATTTGCCGCCGTTGTTTTCGAGGTTGTGTTGATATTGGCATTGTTGGAAGTCAACAATGCAAAACCCCAAGAACACCAGCTTCAATGGGGAGGTTTGGAAGGGAGGATTGAGAATGTTGCCTCACACTCTTGCGTACATGACCAGATACTCGAACAGAGGAAGCGACCTGGTCACAAGGTCTATTCTGTTACCCCACAGGTTTATGAGCCTGGTTTTTCAAAATCCCTTACGCATAAAGGTAGGGCATTACTTGGCTTATCAATGTCACCAGCGCTTCGAAAGGATGTGAAGCAACCTATTAGAATATTTCTAAATTATGATGCTGTTGGCCACTCCCCTGACAGGGATTGCCGAAATGTTGGTGATATTGTCAAACTTGGGGAGCCTTCTGTAACTTCTCTTCATGGTTTTCCATCATGTAATTCTCATGCCGATCCTCCAATCCTGGTTGATTGTTGGTATAACTGCACTTTTGATGATATCTCAGGAGAGGACAAAAAGCATCGCCTTCGCAAGGCATTAGGTCAGACAGCTGATTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAAGGGGAACTTGCGATTAAGTGGATATTCTGCCTGCGGACAAGATGGAGGTGTGCAGCTTCCTCGTGAATATGTTGAGGAGGGAGTGTCTGGTGCCGACTTAGTTCTTTTGGTGACTACAAGACCTACAACTGGAAATACACTTGCTTGGGCAGTGGCATGTGAACGGGATCAATGGGGCCGTGCTATAGCTGGTCATGTTAATGTTGCTCCTCGCCATTTGACAGCTGAGGCAGAGACTTTACTATCAGCTACTTTGATACATGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCCTTTGCTCATTTTAGAGATGATAGAAAAAGACGTCGTAATCAGGTTACTGAACAAGTTATGGATGAAAAGATTGGGCGGATGGTAACACGTGTGGTTCTTCCACGTGTTGTCATGCATTCACGTTATCATTATGCGGCATTCTCAAGAAATTTTACTGGTTTGGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCATTGGGAGAAAAGGCTTTTGATGAATGAGATCATGACTGGTTCTGTGGATGCAAGATCTGTAGTTTCAAAAATGACACTGGCTCTCTTAGAAGATAGTGGGTGGTACAAAGCCAATTATAGCATGGCAGACCGTCTTGATTGGGGTCGCAACCAAGGTGCTGAGTTTGTTACATTCCCTTGCAATCTCTGGAAGGGGGCCTATCGTTGCAACACAACACAGTATTCAGGTTGTACTTATAACAGAGAGGCAGAGGGTTACTGCCCAATTGTAACTTATAGTGGAGACCTTCCTCAGTGGGCTCGGTATTTTCCACAAGCTAATAAAGGTGGACAATCTTCATTAGCTGATTATTGCACTTATTTTGTTGCATACTCCGATGGATCATGTACAGACACCAATGGTGCTCGCCCACCTGATAGAATGCTAGGTGAAGTCCGGGGAGGTAACTCTAGGTGTATGGCCTCATCATTAGTGCGAACAGGATTTGTCCGAGGTTCTCTGGCCCAGGGTAATGGTTGTTATCAGCACAGGTGTATCAACAATTCTCTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCGGGATAGCGGATCAATTCAGTTCCCTGGATTTAATGGCGAATTAATCTGCCCTGCTTATCATGAGCTCTGCAATGCAGATCCAGTGCATGTGTCTGGTCAATGTCCCAATGGATGTAATTTAAATGGAGATTGTGTTGAGGGAAAGTGCTACTGCTTTCTTGGATTTCATGGTCATGATTGCAGTAGGCGTTCCTGCTCCAACAATTGCAGTGACAATGGTAGGTGTCTCTCCAATGGAATTTGTGAATGTAAAGCTGGCTACACTGGTATTGACTGTTCCACTGGGTGTGGGTGGATCATTAGTTTTGTTGCCCCACTATCTAAAGCATATATCAGCAATATCTTGTTTACAGCTGTTTGTGATGAGCAATGCAGCCTTCATGGCGGGGTTTGTGATAATGGAGTTTGCGAATTCCGTTGTTCTGACTATGCAGGATATACCTGCCAGAACAGCTCCATGCTCCTCTCTAGTCTTTCGGTTTGTAAAAATGTGCTGGGAAATGATATTTCTGGACAACATTGTGCACCCAGTGAACCTAGTATGCTTCAGCAGCTAGAAGAAGTTGTTGTCATGCCCAACTACCATCGGTTATTCCCTGGTGGTGCTAGGAAATTATTTAATATATTTGGCAGCTCCTACTGTGACGAAGCGGCTAAGCGGCTTGCCTGCTGGATTTCAATCCAGAAGTGTGACAATGATGGAGACAATAGGCTTCGAGTTTGTCGTTCTGCATGTCAGTCTTATAATCTAGCATGTGGAGCTTCACTGGACTGTGGTGACCAAACCCTTTTCAGCAGTGATGGGGAGGATGCGGGTCAGTGCACTGGCTCTGGTGAGATTAAATTGTCGTGGTTTAATCGACTGCGAACTAGATTGTATTTGAGAAATAGTTCCTTGAAAGGAATATCTGTAAGATATATGCAGCTTTAG 2643 0.4491 MELMVRCTLSRFGFKLRFAAVVFEVVLILALLEVNNAKPQEHQLQWGGLEGRIENVASHSCVHDQILEQRKRPGHKVYSVTPQVYEPGFSKSLTHKGRALLGLSMSPALRKDVKQPIRIFLNYDAVGHSPDRDCRNVGDIVKLGEPSVTSLHGFPSCNSHADPPILVDCWYNCTFDDISGEDKKHRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPREYVEEGVSGADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDDRKRRRNQVTEQVMDEKIGRMVTRVVLPRVVMHSRYHYAAFSRNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDARSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGAEFVTFPCNLWKGAYRCNTTQYSGCTYNREAEGYCPIVTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNGARPPDRMLGEVRGGNSRCMASSLVRTGFVRGSLAQGNGCYQHRCINNSLEVAVDGIWKVCPRDSGSIQFPGFNGELICPAYHELCNADPVHVSGQCPNGCNLNGDCVEGKCYCFLGFHGHDCSRRSCSNNCSDNGRCLSNGICECKAGYTGIDCSTGCGWIISFVAPLSKAYISNILFTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGNDISGQHCAPSEPSMLQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDEAAKRLACWISIQKCDNDGDNRLRVCRSACQSYNLACGASLDCGDQTLFSSDGEDAGQCTGSGEIKLSWFNRLRTRLYLRNSSLKGISVRYMQL 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0563 880 ProSitePatterns EGF-like domain signature 1. 652 663 IPR000742 -
Lal25g0563 880 SUPERFAMILY Frizzled cysteine-rich domain 776 830 IPR036790 GO:0005515
Lal25g0563 880 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 6 852 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lal25g0563 880 SMART egf_5 604 632 IPR000742 -
Lal25g0563 880 SMART egf_5 635 664 IPR000742 -
Lal25g0563 880 Gene3D - 110 300 - -
Lal25g0563 880 Pfam Leishmanolysin 171 596 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lal25g0563 880 Gene3D Laminin 635 666 - -
Lal25g0563 880 Gene3D Laminin 604 633 - -
Lal25g0563 880 PRINTS Leishmanolysin (M8) metalloprotease family signature 245 274 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lal25g0563 880 PRINTS Leishmanolysin (M8) metalloprotease family signature 398 427 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lal25g0563 880 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 6 852 - -
Lal25g0563 880 Gene3D Leishmanolysin , domain 2 310 435 - -
Lal25g0563 880 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 113 600 - -
Lal25g0563 880 Gene3D Leishmanolysin domain 3 438 497 - -
Lal25g0563 880 ProSiteProfiles EGF-like domain profile. 632 664 IPR000742 -
Lal25g0563 880 Gene3D Leishmanolysin domain 4 499 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0563 Lal-Chr25 4139475 4147817 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0563 25 4139475 4147817 Lal25g0563 25 4139475 4147817 ECH
Lal8g0599 8 4153161 4161020 Lal25g0563 25 4139475 4147817 LSH
Lal25g0563 25 4139475 4147817 Lal10g0789 10 15608645 15616668 LSH