Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0561 ATGACATTGAAGTCTAAGAAAGGATGGAAATCTATGTTACATCTTCATTTTAAAGGAAAATCATCGACCCGTTTTTCTCTGTTTCACAAGGTCAATTCAGCAAGCAATGGACCTGCCAAAACACCAGTTTATCTTAATGTGTATGACTTGACACCCATGAATGGTTACATGTATTGGTCTGGTCTTGGTATCTTTCATTCAGGTGTAGAAGTTCATGGTGTAGAATATGCATTTGGAGCTCATGACTACTCAACAAGTGGTGTTTTTGAGGTCGAACCTCGGCAATGCCCAGGCTTCAAGTTCAGGAAGTCAATATTCATTGGAACCACATCTTTGGATGCAGTTCAGGTTAGGGAGTTTATGGAATGCCAGGCAGCAAGCTACAATGGCGACACATATCACTTAATTGTTAAGAATTGCAACCACTTCTGCAAGGACATCTGTCACAAGCTGACAGGGAAATCAATTCCAACATGGGTAAATCGACTGGCCAAGCTAGGTTCAATTTGCAACTGTGTTCTTCCTAAAGCACTAAAAGCTTCTGGTGTAAGGCATGATCCTACTTATCAGCCTCATGATAGCGAGAAGATAAAGCTTAGATGTAATTTCAACTGCTTATCCTCGATCTCGATGCGGCAAAAGCACTTATCGACGTCTTCGATGTTTCTACAGTCACCTCTGAGAGGCTGCTTGGCATCATCATGGGAATTAAGGAAGTCCATTAATCGTTCCATGAAGGAAAGGTAG 747 0.4163 MTLKSKKGWKSMLHLHFKGKSSTRFSLFHKVNSASNGPAKTPVYLNVYDLTPMNGYMYWSGLGIFHSGVEVHGVEYAFGAHDYSTSGVFEVEPRQCPGFKFRKSIFIGTTSLDAVQVREFMECQAASYNGDTYHLIVKNCNHFCKDICHKLTGKSIPTWVNRLAKLGSICNCVLPKALKASGVRHDPTYQPHDSEKIKLRCNFNCLSSISMRQKHLSTSSMFLQSPLRGCLASSWELRKSINRSMKER 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0561 248 PANTHER DESI-LIKE PROTEIN 2 248 - -
Lal25g0561 248 Pfam PPPDE putative peptidase domain 42 176 IPR008580 GO:0008233
Lal25g0561 248 Gene3D PPPDE domains 36 187 IPR042266 -
Lal25g0561 248 PANTHER DESUMOYLATING ISOPEPTIDASE 2 248 IPR008580 GO:0008233
Lal25g0561 248 ProSiteProfiles PPPDE domain profile. 41 178 IPR008580 GO:0008233
Lal25g0561 248 SMART DUF862_2a 41 179 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0561 Lal-Chr25 4109643 4118116 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0561 25 4109643 4118116 Lal25g0561 25 4109643 4118116 ECH