Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0557 ATGGCTCAACGCACCAATCTCTCTCCCGTTCATCCGCTTCAGATCTCCAAAGATCAACCTGGCCTTGACAATCTGATTCCACTTTCACCGCAATGGCTTCTGCCGAAGTCTGGGGAGGGTAAACCTGGAACAAGAACTGTGGAAAACCATGTGAATCCAAATTCACCATTCGGCAATCGCTCTGAGACTGTTAAGGCATCTGGAAATGGTGAGGATGTGCATGATGTCCATAAGAAAAAGGATGTCTTTAGGCCATCCATGCTTGACTCGGATAGTGGACGCCGTGATCGTTGGCGCGATGAAGAGAGAGACACCAAGTCCTCCATACGTAAGGATCGTTGGAGGGATGGTGGAGACAAAGGTGGAGACAAAGACCTTGGTGATGCTCGCAGGGTGGATCGGTGGACTGACAATTCGTCTGCAAAGAACTTTGGAGAAGCACGTCGTGGTCCATCTGATAGACGGCATGAGTCAGGAAACAAGGAAACTAACTTTGATCAGCGGCGAGAGAGCAAGTGGAACTCACGCTGGGGTCCTGATGATAAGGAGCCAGAAGGTCTTCGCGAAAAAGGGAATGACTCTGGAAGAGATAGTGATGGACATCATGATAAAGGCTTGTCTCACATTTCTAATCATGTCAAGGATGAAAAGGAGGGTGATCATATTCGGCCATGGAGACCTAGCTTCTCACAAAGCCGTGGAAGGGCAGACCTGGCCCATCCCCCTAACACAACACCAATCAAACAGGGTTCTACATTTTCCTATGGGCGCGGCCGCGGGGAGAATACTCCCCCTGCTTTTACTCTTGGACATGGACGGGTTGGCTCTGGTGGTAGTTCAATGAATAATAGCACACACTCTGGAACTGTATTGGATAAAGTTGAAACTGAACATGGAGAACCTTGTGCTTTTAGATATAGTAGGACAAAGTTGCTTGATGTGTACAAATTGACTGATATGGGTGCAGATAGAAAATTTGTAGACAATTTTGTGCAGGTACCTAATCTTACACAAGATGAACCATTGGAGCCTCTAGCACTTTCTGTACCAAATTCTGAGGAACTGTCTGTCTTAAAGGGTATTGAGAAAGCGGAAATAATTAGCAGCAGTGCACCTCAGGTGTCAAAAGATGGAAGGAGCTCAACAGATTTTACTCATACGAGACGAATGAAGTCCCAAGATAGAGGTGAAGATGAAGATTCTTACACAGTGGCTGACGGGTTCCCCATTAATAGTGATTCATCCTTTGAAGGAAATAGTTCTGTTCATCATGGTGCTGCATGGCGAGCTACGCCATCGGGTGAACATTCAAGCCCTCTCTTGCATGATAGCAGAGATGTGCCTAGCGATGTTAGATCAACAAAAGCAGATAAGTCCTCCATACATAAGGAAAGTAATTTGGCTTATTTATCTGACTCCAAAGATGCAAGTAAGTGGCAAGCTAGTGATGACCCTATTATCAAGAGGAAGCTTTCTGGCATTTTTGATAATGAACTCGAAAACAGGAGAGTTCCACAGATTGCTCCAGAGGATCTCTCCCTTTTTTACAAAGATCCCAAGGGTCAAATCCAAGGTCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGATATTTTGGTATTGATTTAACTGTTCGTCTAGAAAATTCAGCAGCTGACTCACCATGGTTTTCTCTTGGCGATGTCATGCCCCATTTACGAGCTAAAGCCCGACCACCACCTGGGTTTTCAGCACCAAAATCTAATGATTTTATTGATATACCTGGCCGGCCGAATTCCAGTACCTTTGGGAATACCCTTCCTGGTTTGAGTGAGGCTGATGTGTTGAGAAATGATTCTAGGCACATGCACAGTCCTGCTACAGAATCAGAAAATAGGTTTCTGGAGTCACTCATGAATGCTAACAAGGGCAGTACTCAGCTGGATGGTCTGACATTACCTGAAGGTTTACAAGGTTTTGTTGGAAATAACTCAGGTAGTCTGGACCCAGCTGGAGTAGATAGTGAAAACAACCTTCTCTTGCTAGCTAAGAGAATGGCATTTGAACGACAGAGGTCCCTACCCAATCCTTATACATTTTGGTCGGGGCGAGATGCTGCGGCCCTTGCCTCAAAATCAGATATTGTCCCAGATGCATCACTGCATTCAAAAAATTTGTCTTCAGTGAGTGATAATTCCCACTTACCTCAGTCCCAAAATTCTGAGATGTTGTCGATCATCCAAGGATTATCAGACAGGACATCTGCAGGCTTAAATAATGGCATTGTTGGATGGCCTAATTATCCCATACAGGGTGGACTGGGTTCCCTTCAGAATAAAGTTGACTTACATCATGATCAAAATTTCCCTCAAGTGCCATTTGGAATTCAACAACAAAGGTTGCAAGCACAAAACCCATTGTCTTCAAACAATTTGCTGTCTCAAGCTACTGCTAACCCATCTAGTATGTTGGCAGCAGAGAAGCTACTTTCTTCTGGTTTATCGCAAGATCCACAAGCATTGAATTTGTTGCAACAGCAATACTTGTTGCAATTGCATTCTCTGGCAGCTGCTCCAACACCGCAGATGCCTTTATTAGATAAACTTCTGTTGCTGAAGCAACAGCAGAAGCAGGAGGAGCAGCAGCAGTTAATGCGGCAGCAACAGCTGATTTCACAAGTGCTGCAGGACCAACAATCTAACCAGCGGTTTGCAGATTCCTCATATGGGCTATCGCAAGGAAGTGGAATACCAATGGTGAATTTGCATGTGGATCCTTCTCAACTTCGACCACCACAAGAGATTTTTGGCATGAACTCTCAGATACCAAATCCTATTGTCCATGATGAGCTCAGTAGTAATTATTTGAATTTACTTCCAAAAGTTAGCCAAGACACAAGTTATAATGTAAGAAGTGAAGCTTCTGTACATCTGCCTCATCAATTATTTGAGAATGCTGGTAATAAAAATCGGGGCTCTACTCTTCCTGAACAAATTGATGAAAAGCGCCAGAAGGAAGCATTCCCAACATCAACTCTTGTTGAACGCTCCCAATTGCATGATCAGAACAGATCTGAAGAGGAACCCCACATTGTGCAGAAACCGCTTTCTGTTTCTGACATTACTGCTAAGTCTGTGGCGGAGGTACCATCCAACACTTCTAGGTATGATGGTTCTGTCGTGACTGTGGCCTCTCAGCCTGATGAGAATTCTGGACATCTACAGCATGTTGTGCCTGTTGCTATATCTACAGTGGCATCTCGTGGGATTGAGTTGCCACCTGTGAGCTATATTGGTAAGGATGCGGAGATCAAATCACATATTGCGCTTGAAGAGAAGCAAGCTGGAAGAGATGACTTCAATGTTGAGCTCTCTGTGGTAGATGCACCAAATACTGAACCATCTGAACCTAAAAAATCTACTGAGAAAAAATCTAAGAAGCAAAAATCTTCCAAATTTCAGTCATCTGATCTAGCAAAGGGATTGCTAAAAAATGTGACTTTGCAGCAGTCAAATCATTCAGAAGCTGAAAAGCCAAATGTTAGTGATGTAAAGTTGGGAGAAGCCAACAAGGATGAACCAGTATATGAAACATATCCGCAACAAAGAAGTAAGGGAAATCAAACCAAAGTTCCTGTCACGGCGGCAGCTGATCTTCAAGAAGCTGCTTCCTTACCTGCTAGTGTTCCTGAAAGCATCCCTCAAAAAGTCGTTGTGAGTGAGTCAACCAAGGCCATTGGTTCTGTTCCCAAACAGAATACTGAATTACCTGCAGGGCGAGCATGGAAACCTGCTCCTGGTGTGAAGGCAAAGTCTTTAATAGAAATTCAACTGGAAGAACAAAAGAAAGCGGAGACAGAAAAGCTTGTATCTGAGATTGCTACTTCCGTCAATTCCATGAATCTGACAACTCCCTGGACTGGGGTGATGGCCAATCCAGAGTCTGGAAAGATTTCTGGGGAAAGTCACATAGGAGGCCACACAGGATATCTAATTAAACCCGAAACTTCTGAAAACTTGAAGAGCAAGAAAAGTCCACTACACGATCTATTGGCAGAAGAAGTTTTGAAGAAATTTAATGAAAGAGATTCCAATATTCCAGATGATATGTCCTCACAAAATGTAGCTGTTCAGTCAGAATTACCGGATCATTCCAACTTCGTTGAGGCAAAAGAAAGTAAAAGAAGCCGAAAAAAGGTGGCCAAATCGAAGAGTTCAGGGGCCAAAGCCTCTGTAACTGTTACATCTAATGAAATGCCAATAGCTTCAAGTCCTGTTGAAAGGGCAAAAATTTCCCGCCCGCAGGTGGAGAAAGAAGTATTGCCTGCCATTCCTGGACCCTCACTGGGAGATTTTGTTCTTTGGAAAGGAGAGCAAGAGGCTCCAAGCCCATCTCCAGCGTGGTCTACTGATCCCGGTAGGGTTCCTAAACCAACTTCATTAAGAGACATTCTAAAGGAGCAGGAGAAAAAGGCTTCTTCTGTAGTGCCCACTAGCCCGATGCCTACCCCTCAGAAATTACAGCCTGCCCAGGCTAATTGGAATAGTGTTTCGTCACGGTCAATTTCAGCTTCCTCTCCATCCAAAGTGGCCTCTCCAATCCAGATTAACTCCCATGCTTCTTCTCAGTCAAAATACAAAGGAGATGATGATTTGTTCTGGGGTCCAATTGAGCAATCTAAGCCAGAAACTAAGCAGTCAGATTTTCCTCAGCTTGCAAGCCAGGGGAGCAGGGGTTCCAAAAATGTGCCCCAGAAAGGTAATTCACTCGCATCATTAACTCGACAAAAATCAGCTAGTAGCAAACCAACTGAACAGTCTCTATCATCATCTGCCTCTTCTCCATCAATGCTGAAATCAAAAAACGATTCTATGACTAAGCATTCTGAGGCCATGGGCTTCAGAGACTGGTGTGAAAATGAGTGTGAAAGGCTTATTGGGACAAAAGACACAAGTTTCCTCGAATTTTGTTTGAAGCAATCCAAATCTGAGGCTAAGATACTTCTCACTGAAAACCTTGGCTCATATGACCGTGACCATAAGTTCATTGATAAATTCCTCAATTACATGGAGATGTTACCATCAGATGTTTTGGAAATAGCTTTTCAGAGGAGCGATCAGAAAGTCGGTGGACTTGGTGGCGGACGCATACTATCTGCAAATGCAGCAGCCGATGTGCATGATGAAGGATCCTCAAAAGGTGGAGGTGGAGGTGGTGGAAAGAAGAAGGGTAAGAAAGGGAAAAAGGTCAGCCCTTCTGTTTTGGGATTTAATGTTGTGAGTAACCGGATCATGATGGGTGAGATACAAAAAGTAGAAGATTAA 5310 0.4399 MAQRTNLSPVHPLQISKDQPGLDNLIPLSPQWLLPKSGEGKPGTRTVENHVNPNSPFGNRSETVKASGNGEDVHDVHKKKDVFRPSMLDSDSGRRDRWRDEERDTKSSIRKDRWRDGGDKGGDKDLGDARRVDRWTDNSSAKNFGEARRGPSDRRHESGNKETNFDQRRESKWNSRWGPDDKEPEGLREKGNDSGRDSDGHHDKGLSHISNHVKDEKEGDHIRPWRPSFSQSRGRADLAHPPNTTPIKQGSTFSYGRGRGENTPPAFTLGHGRVGSGGSSMNNSTHSGTVLDKVETEHGEPCAFRYSRTKLLDVYKLTDMGADRKFVDNFVQVPNLTQDEPLEPLALSVPNSEELSVLKGIEKAEIISSSAPQVSKDGRSSTDFTHTRRMKSQDRGEDEDSYTVADGFPINSDSSFEGNSSVHHGAAWRATPSGEHSSPLLHDSRDVPSDVRSTKADKSSIHKESNLAYLSDSKDASKWQASDDPIIKRKLSGIFDNELENRRVPQIAPEDLSLFYKDPKGQIQGPFKGIDIIGWFEAGYFGIDLTVRLENSAADSPWFSLGDVMPHLRAKARPPPGFSAPKSNDFIDIPGRPNSSTFGNTLPGLSEADVLRNDSRHMHSPATESENRFLESLMNANKGSTQLDGLTLPEGLQGFVGNNSGSLDPAGVDSENNLLLLAKRMAFERQRSLPNPYTFWSGRDAAALASKSDIVPDASLHSKNLSSVSDNSHLPQSQNSEMLSIIQGLSDRTSAGLNNGIVGWPNYPIQGGLGSLQNKVDLHHDQNFPQVPFGIQQQRLQAQNPLSSNNLLSQATANPSSMLAAEKLLSSGLSQDPQALNLLQQQYLLQLHSLAAAPTPQMPLLDKLLLLKQQQKQEEQQQLMRQQQLISQVLQDQQSNQRFADSSYGLSQGSGIPMVNLHVDPSQLRPPQEIFGMNSQIPNPIVHDELSSNYLNLLPKVSQDTSYNVRSEASVHLPHQLFENAGNKNRGSTLPEQIDEKRQKEAFPTSTLVERSQLHDQNRSEEEPHIVQKPLSVSDITAKSVAEVPSNTSRYDGSVVTVASQPDENSGHLQHVVPVAISTVASRGIELPPVSYIGKDAEIKSHIALEEKQAGRDDFNVELSVVDAPNTEPSEPKKSTEKKSKKQKSSKFQSSDLAKGLLKNVTLQQSNHSEAEKPNVSDVKLGEANKDEPVYETYPQQRSKGNQTKVPVTAAADLQEAASLPASVPESIPQKVVVSESTKAIGSVPKQNTELPAGRAWKPAPGVKAKSLIEIQLEEQKKAETEKLVSEIATSVNSMNLTTPWTGVMANPESGKISGESHIGGHTGYLIKPETSENLKSKKSPLHDLLAEEVLKKFNERDSNIPDDMSSQNVAVQSELPDHSNFVEAKESKRSRKKVAKSKSSGAKASVTVTSNEMPIASSPVERAKISRPQVEKEVLPAIPGPSLGDFVLWKGEQEAPSPSPAWSTDPGRVPKPTSLRDILKEQEKKASSVVPTSPMPTPQKLQPAQANWNSVSSRSISASSPSKVASPIQINSHASSQSKYKGDDDLFWGPIEQSKPETKQSDFPQLASQGSRGSKNVPQKGNSLASLTRQKSASSKPTEQSLSSSASSPSMLKSKNDSMTKHSEAMGFRDWCENECERLIGTKDTSFLEFCLKQSKSEAKILLTENLGSYDRDHKFIDKFLNYMEMLPSDVLEIAFQRSDQKVGGLGGGRILSANAAADVHDEGSSKGGGGGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQKVED 1769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1236 1258 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 407 421 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 147 224 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 990 1004 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1163 1182 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1555 1617 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 369 459 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1358 1621 - -
Lal25g0557 1769 SUPERFAMILY GYF domain 501 568 IPR035445 -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 439 459 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 47 66 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1401 1417 - -
Lal25g0557 1769 Coils Coil 872 892 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1130 1148 - -
Lal25g0557 1769 PANTHER GYF DOMAIN-CONTAINING PROTEIN 3 1769 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1361 1376 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1121 1151 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1719 1746 - -
Lal25g0557 1769 ProSiteProfiles GYF domain profile. 511 562 IPR003169 GO:0005515
Lal25g0557 1769 MobiDBLite consensus disorder prediction 381 402 - -
Lal25g0557 1769 Gene3D - 500 578 IPR035445 -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1 252 - -
Lal25g0557 1769 CDD GYF 511 568 IPR003169 GO:0005515
Lal25g0557 1769 MobiDBLite consensus disorder prediction 67 137 - -
Lal25g0557 1769 PANTHER GYF DOMAIN-CONTAINING PROTEIN 3 1769 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 1487 1538 - -
Lal25g0557 1769 MobiDBLite consensus disorder prediction 980 1026 - -
Lal25g0557 1769 Pfam GYF domain 515 558 IPR003169 GO:0005515
Lal25g0557 1769 SMART gyf_5 512 567 IPR003169 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0557 Lal-Chr25 4077546 4085563 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0557 25 4077546 4085563 Lal25g0557 25 4077546 4085563 ECH
Lal8g0588 8 4080243 4089292 Lal25g0557 25 4077546 4085563 LSH
Lal25g0557 25 4077546 4085563 Lal10g0782 10 15538481 15550092 LSH