Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0556 ATGGCAATTTTGGTCCCTCACTCTGCATTTCTTCTACCATTTCTTGCTTTCCTTCTCTCACTTAACCTTGCTTATTCTGAACCATTCATTGGTGTGAACTATGGACAAGTTGCCGACAACCTGCCACCACCGTCAGCCACCGCTAAACTGCTCCAATCCACCGCCATCGAGAAAGTCCGATTATATGGATCAGACCCGGCCATAATAAAAGCACTAGCCAACACCGGAAAAGGAATCGTCATCGGAGCCGCAAACGGCGACGTTCCAGCACTTTCTTCAGACCCAAACTTCGCCAAAAACTGGGTAGCCTCCAACGTCGTTCCGTACTACCCCGCCAGCAACATCATCCTCATAACCGTTGGTAACGAGGTAATAACATCCAACGACCAGAACCTGATGAACCAGCTTGTTCCAGCGGTGCAGAATGTCCAAAATGCCCTTGATGCTGTATCTTTGGGAGGGAAAGTGAAGGTCTCTACCGTCCATTCAATGGCGGTTTTGAGAGAATCTGAACCTCCTTCTGTTGGAAAGTTCCACCCTGAGTTCGATACCGTTTTGAAAGGGTTGTTGTCGTTTAACAATGCAACAGGTTCTCCCTTTGCTATTAATCCTTACCCTTACTTTGCATTTAGGGATGATCCTGGGAGAGCTGAAAACTTGGCCTATTGCCTCTTCCAGCCAAACTCGGGCCGAATTGACTCAAACTCCAATCTCAAGTACATGAATATGTTTGATGCTCAGGTAGATGCTGTGCGTTCTGCTTTGGATTCTCTGGGGTTTAAGAATGTGGAGATTGTTGTTGCTGAGACAGGGTGGCCATACAAAGGAGATAGCGATGAGGTTGGTGCGAGCCTTGAGAATGCTAAGGGTTACAATGGTGGTTTGATTTCTCACCTGAGATCCATGGTTGGAACCCCATTGATGCCAGGGAAATCAGTGGATACATACCTCTTTGCCTTATATGATGAGGACTTGAAGCCTGGACCTGCTTCTGAGAGAGCCTTTGGACTTTACAACCCTGATCAATCCATGATCTATGATTCTGGTCTCTCCCAACAGAAGCAGATTAACACCACTAGCCCCGTGGTCGCTCCAACTACTCCGGAGCGGTCAAAATCTCCGGCCACTCAAACACCAATAGTTACAAGTCCAACAACACCAAAACCAGATAAAGCATTATGGTGTGTGCCAAAAGCAGGAGTATCAAATGTGAACCTTCAAGCAAATTTGGATTATGCTTGCGGGCGCGGTATTGATTGTAGTCCAATTCAACCAGGTGGAGCTTGTTTTGAACCAAACACATTACTAAACCATGCTGCATATGCTATGAATCTTTTCTATCAAGCTGCTGGACAAAATCCATTGACTTGTGATTTCTTGCAGACAGCAATGATGTCAATGAATAATCCAAGACAAAGGGCTAATGTTGAACATATTGGTTTCACTGAAAGGAGTGGAACCAAAGATAAGAGTGTTACTGGACTCGAAAAGGGGATCAAGACGATGAAATTTCGTGATAACAGGGCGTTGTTGATGATCCTTCGACCTTTGAGCCATGTTACAATAATTGTGTGTATGCTGGAGGAAATGCATAATCGAAAAAGCAAGAAAGTAAATAAAGGAGGACACTTTTTATTGTTTTAA 1644 0.4489 MAILVPHSAFLLPFLAFLLSLNLAYSEPFIGVNYGQVADNLPPPSATAKLLQSTAIEKVRLYGSDPAIIKALANTGKGIVIGAANGDVPALSSDPNFAKNWVASNVVPYYPASNIILITVGNEVITSNDQNLMNQLVPAVQNVQNALDAVSLGGKVKVSTVHSMAVLRESEPPSVGKFHPEFDTVLKGLLSFNNATGSPFAINPYPYFAFRDDPGRAENLAYCLFQPNSGRIDSNSNLKYMNMFDAQVDAVRSALDSLGFKNVEIVVAETGWPYKGDSDEVGASLENAKGYNGGLISHLRSMVGTPLMPGKSVDTYLFALYDEDLKPGPASERAFGLYNPDQSMIYDSGLSQQKQINTTSPVVAPTTPERSKSPATQTPIVTSPTTPKPDKALWCVPKAGVSNVNLQANLDYACGRGIDCSPIQPGGACFEPNTLLNHAAYAMNLFYQAAGQNPLTCDFLQTAMMSMNNPRQRANVEHIGFTERSGTKDKSVTGLEKGIKTMKFRDNRALLMILRPLSHVTIIVCMLEEMHNRKSKKVNKGGHFLLF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0556 547 SUPERFAMILY (Trans)glycosidases 30 347 IPR017853 -
Lal25g0556 547 Pfam X8 domain 393 464 IPR012946 -
Lal25g0556 547 MobiDBLite consensus disorder prediction 358 387 - -
Lal25g0556 547 Gene3D Glycosidases 29 358 - -
Lal25g0556 547 Gene3D - 389 488 - -
Lal25g0556 547 PANTHER GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 7 467 - -
Lal25g0556 547 SMART X8_cls 393 476 IPR012946 -
Lal25g0556 547 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 467 IPR044965 GO:0004553|GO:0005975
Lal25g0556 547 Pfam Glycosyl hydrolases family 17 30 347 IPR000490 GO:0004553|GO:0005975
Lal25g0556 547 MobiDBLite consensus disorder prediction 358 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0556 Lal-Chr25 4065470 4069762 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0556 25 4065470 4069762 Lal25g0556 25 4065470 4069762 ECH
Lal8g0586 8 4072534 4075280 Lal25g0556 25 4065470 4069762 LSH