Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0553 ATGAACGTGAAATCAAGTTTCTCAGAATTATTCATGGTTTTGCAAAGAAGACTAACAGTGAGTGTAGTTATAGTATTATTGTTTGCTCAGTTAGGTTTTTGTTTGAATTCCAGAACAGAATGGTTATCATTACTGGAACTTCGTTCATCATTAGGGATAAGGGGAAAAGATTGGCCCATAAAAGCCGAACCTTGCCGGAATTGGACCGGGGTTCAGTGCAGGAATGGTGGAGTTGTTGGGATCAACATATCCGGGTTGAAACGAACCCGAATTGGTCGTGTTCATCCAAGTTTTGATGTTGATGCTCTTACCAATTTCACAGCTTTAGCTTCATTTAATGCTTCTGGGTTCATGCTAAATGGGTCAATACCTGATTGGTTTGGCCAAAATCTTAATGCAATGGAAGTGCTTGATCTAAGGTCTTGTTCTATAACTGGTTTCATTCCTGAGTCACTTAAGGGTTTGAATGTGTTGAAGACTTTGTTACTTTCAAGGAATAGTTTAACTGGTAGAATGCCTTCAAGTTTGGGATTGTTATCTGAGCTATCAGTTCTTGATCTGTCTGGGAATTCACTTTCAGGATCAGTGCCTAACTCTTTGTCGAAGCTTCGTAATTTAACAAGGCTCGATCTTTCTTCTAATTTCTTATCTGGGTCTATTCCACCCAAACTAGGTTCCCTTTCGAACCTCCATGTTTTGAACCTTTCTGACAATGAACTCATTTCTTCGATCCCTGATCAACTCGGCAACCTTTCCAAGCTGGTTGAGCTTGATCTTGGGATGAATTCATTGTCTGGTTCATTGCCAGATAGTTTATTTACTAAACTTCTTGACATTCATGTTCTCATTCTCGGAGGAAATATGTTTGACGGTGCTCTTCCTAATTCGCCGTGGTCATTGCCTAGCTTGCATTTTCTTGATGTGTCCAGCAACAATCTCACTGGTCCCCTACCGAAATTCTCCGATTTTAGTTCCACTGGTGCCACATTCAATCTTTCAAACAATTTGTTCTATGGATCTTTGAATACTTCGTCTACCAAGTTTAAAATGATTGATTTGTCCGGTAATTATTTGCAAGCTGTGGTGCAAGGTGGTGGTAATGTTACTCTAACTAGGAATTGCTTAAAGACGATTCCAGACCAGAGGGATTCAGAAGATTGTAGACTGTTTTATGCTCAAAGAAGTTTATCCTTTGCTCCTGGGATCCAAGAACCAACTCAATCGCCGCTCCCGGAATCTGAGTCCAAGAACAATAAACGAGTGACATTCATACTGGCAGGTACATTTGGTGGACTTGGCTTTATTGTGCTTGTAGCATTGGTCATCATACTGGTTCTAAGACATTGTAGTAATCGTAGTACTTTGGCACTTCAAAGAGGGACCACAAATGGAGGGGCTGTTCCAGAAGGGGATAGTCCTACACCTCCCAAGGGTCCTGTCTTTGTAAAGAGTGTGGGAAAATCATTTACTTTTGAGCAAATTCTCCATTTGACTGGTAATTTTTCGGAAACAAATATCATGAAGCATGGTCATTCTGGAGACCTCTACTTGGGAGTCTTGGAAGGTGGAGCAACTGTGGTTATCAAAAAAGTAGATTTAAATTTATTTAAGAGAGAATCATGCCTTATAGAATTGGGATTATTAAGCAAGGTTTCTCATGCAAGATTGGTCCCAATCCTAGGGCACTGCTTGGAGAATGAGAATGAGATATGTATAATTTACAAGTACATGCCAAATGGAGATTTGGCTACTTCCTTGCACAGAGTCACCGATTCAGATGGTAAATTACAATCCCTGGATTGGATCACGAGATCGAAAATTGCAATAGGAGCTGCTGAAGGCCTAGCTTACCTACATGAGTGCAGCCCTCCCATTGTTCACAGAGACGTCCAAGCTAGCAGTATACTTCTTGATGATAAATTTGAAGTGCGACTGGGAAGTTTGAGTGAGGTTACTTCCCAAGGAGATCTTCATCAGAGTGTCTTCTCAAGGCTTTTCAGCAAGCCACTATCTTTTAATCAAGTGAACCCTGGTACATCATCTGTGAGTAGTGACTATGATGTCTATTGTTTTGGGAAGATTTTACTGGAGCTAGTTACCGGTAACCTCGATGTCAGCAAATCCGATGACGCCTCGACAAAAGAGTGGTTAGAACAAACCTTGTCTTACATAACCATCTATGATAAAGAAAGGGTGACTAAGATATTAGACCCATCTTTGATCATAGATGAGGACCTATTGGAAGAGGTATGGTCTATGGCAATTGTTGCAAGATCATGCTTGAATCCGAAGCCATCGAAACGTCCTCTCATGAGACATGTCCTTAAAGCACTTGAAAATCCGTTGAAGGTCGTTAGAGTAGACAATGGTAGCTCGGAAAGGTTGAGAACAACTTCATCTCGGAGATATTGGAGCAGTGCATTATTTGGTAGCTGGACACATAGTTCATCAGAGAGTGTTACTGCCATAGGGAATGCAAGAGAGGGTACTAGTAGCTTTAAACAATCATATAGGGTAGGTTCTCAGGGTAGTGCAGGATATGATCATTCATCTTCAAATAAAAGATCATCTAATGAAATATTCCCTGAACCATTGGAAATGCAAGATGTGGAGATTGGAGATGCAAGATGA 2631 0.4078 MNVKSSFSELFMVLQRRLTVSVVIVLLFAQLGFCLNSRTEWLSLLELRSSLGIRGKDWPIKAEPCRNWTGVQCRNGGVVGINISGLKRTRIGRVHPSFDVDALTNFTALASFNASGFMLNGSIPDWFGQNLNAMEVLDLRSCSITGFIPESLKGLNVLKTLLLSRNSLTGRMPSSLGLLSELSVLDLSGNSLSGSVPNSLSKLRNLTRLDLSSNFLSGSIPPKLGSLSNLHVLNLSDNELISSIPDQLGNLSKLVELDLGMNSLSGSLPDSLFTKLLDIHVLILGGNMFDGALPNSPWSLPSLHFLDVSSNNLTGPLPKFSDFSSTGATFNLSNNLFYGSLNTSSTKFKMIDLSGNYLQAVVQGGGNVTLTRNCLKTIPDQRDSEDCRLFYAQRSLSFAPGIQEPTQSPLPESESKNNKRVTFILAGTFGGLGFIVLVALVIILVLRHCSNRSTLALQRGTTNGGAVPEGDSPTPPKGPVFVKSVGKSFTFEQILHLTGNFSETNIMKHGHSGDLYLGVLEGGATVVIKKVDLNLFKRESCLIELGLLSKVSHARLVPILGHCLENENEICIIYKYMPNGDLATSLHRVTDSDGKLQSLDWITRSKIAIGAAEGLAYLHECSPPIVHRDVQASSILLDDKFEVRLGSLSEVTSQGDLHQSVFSRLFSKPLSFNQVNPGTSSVSSDYDVYCFGKILLELVTGNLDVSKSDDASTKEWLEQTLSYITIYDKERVTKILDPSLIIDEDLLEEVWSMAIVARSCLNPKPSKRPLMRHVLKALENPLKVVRVDNGSSERLRTTSSRRYWSSALFGSWTHSSSESVTAIGNAREGTSSFKQSYRVGSQGSAGYDHSSSNKRSSNEIFPEPLEMQDVEIGDAR 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0553 876 Gene3D Phosphorylase Kinase; domain 1 477 576 - -
Lal25g0553 876 Pfam Protein tyrosine and serine/threonine kinase 507 776 IPR001245 GO:0004672|GO:0006468
Lal25g0553 876 SUPERFAMILY Protein kinase-like (PK-like) 478 778 IPR011009 -
Lal25g0553 876 MobiDBLite consensus disorder prediction 834 876 - -
Lal25g0553 876 Pfam Leucine rich repeat 158 214 IPR001611 GO:0005515
Lal25g0553 876 Gene3D Ribonuclease Inhibitor 277 371 IPR032675 -
Lal25g0553 876 PRINTS Leucine-rich repeat signature 182 195 - -
Lal25g0553 876 PRINTS Leucine-rich repeat signature 227 240 - -
Lal25g0553 876 Gene3D Transferase(Phosphotransferase) domain 1 577 795 - -
Lal25g0553 876 Gene3D Ribonuclease Inhibitor 38 189 IPR032675 -
Lal25g0553 876 Gene3D Ribonuclease Inhibitor 190 276 IPR032675 -
Lal25g0553 876 PANTHER RECEPTOR-LIKE PROTEIN 55 291 832 - -
Lal25g0553 876 PANTHER RECEPTOR-LIKE PROTEIN 55 22 273 - -
Lal25g0553 876 Pfam Leucine Rich Repeat 135 155 IPR001611 GO:0005515
Lal25g0553 876 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 22 273 - -
Lal25g0553 876 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 291 832 - -
Lal25g0553 876 ProSiteProfiles Protein kinase domain profile. 501 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0553 876 SMART LRR_typ_2 227 250 IPR003591 -
Lal25g0553 876 SMART LRR_typ_2 203 226 IPR003591 -
Lal25g0553 876 SMART LRR_typ_2 179 202 IPR003591 -
Lal25g0553 876 SMART LRR_typ_2 251 275 IPR003591 -
Lal25g0553 876 SMART LRR_typ_2 300 322 IPR003591 -
Lal25g0553 876 MobiDBLite consensus disorder prediction 834 859 - -
Lal25g0553 876 SUPERFAMILY L domain-like 56 356 - -
Lal25g0553 876 ProSiteProfiles Leucine-rich repeat profile. 229 252 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0553 Lal-Chr25 4041467 4046542 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lal25g0553 PK_Tyr_Ser-Thr 2.2e-21 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0553 25 4041467 4046542 Lal25g0553 25 4041467 4046542 ECH
Lal8g0579 8 4024433 4030435 Lal25g0553 25 4041467 4046542 LSH