Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0552 ATGATATCAAAGCTAGAGCCCAACTTCTTTCGGGTTGTCATGGGCCAAAGATGCCCTTTAGTTATGGGTCAAAAGAAACCAAAGATGCCCTTTAGTTATGGGCCAAAGATGCCCTTTAGTTATAGGAAGTATTGTAGTGTTGATATAATGGCCTCAAACTCATCAAGTTGGACAACAAAGCAGAACAAGAAGTTCGAGAATGCCTTGGCCGTCTACGATAAGGACACGCCGGATCGATGGCAGAAGCTGGCCATGGCGGTCGGAGGTAAGACGGTGGAGGAGGTGAAAAGGCATTATGAGATGCTTGTGGAAGATTTGAAACAGATTGAGGAAGGTCATGTTCCCTTGCCCAATTATAGAAATGCTACAATAGTTGGAGGTAGCAAAAAAGGTTGCAATTACATGGATGCTGAACAAAGGATGAAGGTTCTAAGCCTCAAGTGA 444 0.4414 MISKLEPNFFRVVMGQRCPLVMGQKKPKMPFSYGPKMPFSYRKYCSVDIMASNSSSWTTKQNKKFENALAVYDKDTPDRWQKLAMAVGGKTVEEVKRHYEMLVEDLKQIEEGHVPLPNYRNATIVGGSKKGCNYMDAEQRMKVLSLK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0552 147 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 52 147 IPR044636 GO:0003700
Lal25g0552 147 ProSiteProfiles SANT domain profile. 52 107 IPR017884 -
Lal25g0552 147 Gene3D - 50 116 - -
Lal25g0552 147 Coils Coil 92 112 - -
Lal25g0552 147 SUPERFAMILY Homeodomain-like 56 110 IPR009057 -
Lal25g0552 147 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 52 147 - -
Lal25g0552 147 SMART sant 53 105 IPR001005 -
Lal25g0552 147 CDD SANT 56 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0552 Lal-Chr25 4024072 4027085 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal25g0552 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0552 25 4024072 4027085 Lal25g0552 25 4024072 4027085 ECH
Lal25g0552 25 4024072 4027085 Lal10g0847 10 16040632 16042315 LSH