Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0540 ATGGCTGATACTTCAGGCTCAGCCTCTTCCAAGAGAATGTGGTGCTCCTTACCTGAACGGTTTCAGCTTCATGTAGCCATGCTGCTTCTGCAGTTTGGCTATGCTGGGTTCCATGTGGTTTCTAGAGCTGCCCTTAACATGGGCGTTAGCAAACTTGTTTTCCCAGTCTATAGGAACATCATTGCTTTGCTTTTGCTCCTTCCATTTGCTTACTTCTTGGAAAAGTTAGAAGGAGAGGCCAGCGATCACTTTAAACTTCCTCGGCCAGTTCTTTCTTCTGGCGCTTGTTGGGATTACAGCAAATCAAGGTTTCTACTTGCTTGGATTGGAGAACACAACCCCTACCTTCGCATCAGCAATACAAAACTCCGTTCCAGCCATTACATTTCTCATGGCAGTTATACTCAGGCAATACCTTTACTAGTTAATACAATAATTGTCTTTATTTGCATGATAGAGCAAGTGAGAGTGAACAGAAAAGATGGGGTGGCTAAGGTAGCAGGAACAATATTATGTGTAGCAGGAGCAACAGTGATTACACTTTACAAGGGTCCAACAATATATAGCCCAACACCACCACTACACAGCACCAACATGATAACAACAACAACAACAACACAAGTATTTGACTTTGGGTCACTCTCACTTGGAGATGCTAAGGGCAAAAACTGGACCCTTGGTTGCATCTACCTCATAGGGCATTGTTTGTCTTGGTCTGGTTGGCTTGTGTTGCAAGCACCTGTTCTTAAGAAATACCCTGCACGTCTTTCTGTCACTTCTTATACTTGTTTCTTTGGACTCTTACAATTTCTTCTTATTGCTTTGGTCCTTGAAAGAGATGCTCAAGCTTGGGTTTTTCACTCTGGTGGAGAAGCTTTCACAATTTTATACGCTGGAGTGGTGGCATCTGGAATTGCCTTTGCCGTACAAATATGGTGCATTGATAGAGGTGGTCCTGTATTCGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTTGCAATTATGGCTTCCCTTGCTTTAGGAGAAGAGTTCTACTTAGGAGGGATCATTGGGGCAGTGTTGATTGTAGCAGGACTATACCTAGTTTTGTGGGGTAAAAGTGAAGAGAAGAAATTTGCAAAGGAACAACTTGCAATTACATCCACTACTCATGAACATAGCATCATTAGGCCTGCAAGCCATGCCAAAGCATCACTTATTCAACCACTCCTTCCATCATCAACAGAGAATGTTTGA 1239 0.4286 MADTSGSASSKRMWCSLPERFQLHVAMLLLQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKLEGEASDHFKLPRPVLSSGACWDYSKSRFLLAWIGEHNPYLRISNTKLRSSHYISHGSYTQAIPLLVNTIIVFICMIEQVRVNRKDGVAKVAGTILCVAGATVITLYKGPTIYSPTPPLHSTNMITTTTTTQVFDFGSLSLGDAKGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLLIALVLERDAQAWVFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASLALGEEFYLGGIIGAVLIVAGLYLVLWGKSEEKKFAKEQLAITSTTHEHSIIRPASHAKASLIQPLLPSSTENV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0540 412 PANTHER WAT1-RELATED PROTEIN 16 78 - -
Lal25g0540 412 PANTHER WAT1-RELATED PROTEIN 146 399 - -
Lal25g0540 412 PANTHER WAT1-RELATED PROTEIN 146 399 IPR030184 GO:0016021|GO:0022857
Lal25g0540 412 PANTHER WAT1-RELATED PROTEIN 16 78 IPR030184 GO:0016021|GO:0022857
Lal25g0540 412 Pfam EamA-like transporter family 226 364 IPR000620 GO:0016020|GO:0016021
Lal25g0540 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 268 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0540 Lal-Chr25 3937119 3940647 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0540 25 3937119 3940647 Lal25g0540 25 3937119 3940647 ECH
Lal8g0557 8 3864664 3868940 Lal25g0540 25 3937119 3940647 LSH
Lal25g0540 25 3937119 3940647 Lal10g0868 10 16185446 16189089 LSH
Lal25g0540 25 3937119 3940647 Lal21g0132 21 926979 929881 PCT
Lal21g0132 21 926979 929881 Lal25g0540 25 3937119 3940647 PCT