Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0535 ATGGAAGGTGTTGATCAAAGAACTAATTGTGCATTTGGGTCACCCGGAACAATTCGTAGATCACAAAATAGATTGAATCCTCTCAATCAAATGGGTATTCCACCCTTTTACCCTAATAGTAATAGTAATTTGCCTTCAAGTTTAAACCATTATCCACAAATATTGGCCTCACAACCCCAGAGATTGCGGTCTTTGAATCTGAGCCCGTTGAATTTGAGCCCTGCTACGGGGTCATCATCCCATGTGTCTCTGTCTCAGCCCTCATTCTTTTGTCGGGATTCCTTGCCCCCTTTGAGCCCTTCGACTTATCAACTATCGGCCACTACCCCATTGGTTGAACCGGTTTCGGCAAATGTGTCTGTGGAAAAAAGCTTAGGTAATGTAACTTCTGTGCCTCTTAACCGTGGTCATGTTGTTCAGCTTGGAAATAGTCTTCCCCCTCGTAAGGGACATAGACGCTCGAGCAGTGATTCCCCTCTAGGAATCTCTGATTACATTCAGTCTATTCCTCAGTTTGTTTCGTCCACTGCTTGGAATGATCGTGACAATTCGGTTTCAAGAGGAGAAAGCTTGGGTTTTGAGAAGAAGCCAGTTCAGTTGGTGTTGAAGGTGCCGAATAAGGATAAGGACCACGTTGATGGCAATAACGGAGAAACAGGGAAAGTGGGGAAAGAGGAATCGGTGGATGACATATTTAGCGCATACATGAATTTGGACAACATTAATGATATGGGTTTTTCTATGGAAGATAAAGATATGGATAGCAAAACTAGTACCAAGACAGTTGAAAGCAGTGACAATGAAGTTGAGAGTCGTGCAAATGGGAAAACAACCGGTGTTCGGGGGGAAAGTTCAAGCTTCTCTGAAGAACGAAAGGAAGGAGTGAAGAGGAGTTCGAATGGAGACATTGCACCTGCTTCCCGACACCGGAGAAGTTTCTCATTGGATAGTTCCATTGGAAATTTTAGTATCGAAGATGAACCGCCTAAGCTTCCTCCTTTGCAAAATCGATTTGGTCAAAACTTGCCAAGCAATCCGATAGACGGTAAAACATGTGAAACCAGCTTGGAGTTTGGAAATGGTGAGTTCAGCTCTGAGGAGCTAAAGAAAATAATGGAAAATGATAAGCTTTCTGAAATTGCAATGTCTGATCCCAAGCGTGTAAAAAGGGTTTTGGCTAATCGTCTATCTGCTGCACGCTCAAAAGAGCGGAAGACACATTACATTTCTGAATTGGAGCACAAGGTTCAAACTCTTCAGACAGAGACAACCACATTGTCTACTGAATTTACCAAATTACAGATCGATACCGTAGAGCTTAAAAGTCAGAATAACGAGTACAAATTGAGGCTTCAAGCCTTGGAACAACAGTCCCAACTGAAAGATGCTCTGAAAGAGACCTTGGATACCGAGGTTCGGCGTTTAAGGCGCACTGTTGCTGACCTCGGTGGAGAGTCCCTCCTCTCGAGTCGCATGGCTCAACAGCTTGCTATGAATCAACACATGTTCCAGTTACAGCAGCAACAGCAGGTCTGCCAAGTTAGACAATTTCAACTGCAGAACAATCACCCGACACAATCTCAGCCGCAACCGCAGCCGCAGCCGCAGCCACAGCCACAGACACAGAAGACTCAGTATAATGAATTGCAATCCCCGCGACAGAACGGCAAAGCTACTGCTTACTGA 1686 0.4466 MEGVDQRTNCAFGSPGTIRRSQNRLNPLNQMGIPPFYPNSNSNLPSSLNHYPQILASQPQRLRSLNLSPLNLSPATGSSSHVSLSQPSFFCRDSLPPLSPSTYQLSATTPLVEPVSANVSVEKSLGNVTSVPLNRGHVVQLGNSLPPRKGHRRSSSDSPLGISDYIQSIPQFVSSTAWNDRDNSVSRGESLGFEKKPVQLVLKVPNKDKDHVDGNNGETGKVGKEESVDDIFSAYMNLDNINDMGFSMEDKDMDSKTSTKTVESSDNEVESRANGKTTGVRGESSSFSEERKEGVKRSSNGDIAPASRHRRSFSLDSSIGNFSIEDEPPKLPPLQNRFGQNLPSNPIDGKTCETSLEFGNGEFSSEELKKIMENDKLSEIAMSDPKRVKRVLANRLSAARSKERKTHYISELEHKVQTLQTETTTLSTEFTKLQIDTVELKSQNNEYKLRLQALEQQSQLKDALKETLDTEVRRLRRTVADLGGESLLSSRMAQQLAMNQHMFQLQQQQQVCQVRQFQLQNNHPTQSQPQPQPQPQPQPQTQKTQYNELQSPRQNGKATAY 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0535 561 SUPERFAMILY Leucine zipper domain 386 442 IPR046347 GO:0003700|GO:0006355
Lal25g0535 561 MobiDBLite consensus disorder prediction 246 270 - -
Lal25g0535 561 Pfam bZIP transcription factor 386 444 IPR004827 GO:0003700|GO:0006355
Lal25g0535 561 PANTHER BZIP TRANSCRIPTION FACTOR 71 561 - -
Lal25g0535 561 MobiDBLite consensus disorder prediction 246 314 - -
Lal25g0535 561 SMART brlzneu 382 446 IPR004827 GO:0003700|GO:0006355
Lal25g0535 561 MobiDBLite consensus disorder prediction 539 561 - -
Lal25g0535 561 MobiDBLite consensus disorder prediction 139 160 - -
Lal25g0535 561 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 71 561 - -
Lal25g0535 561 Coils Coil 437 474 - -
Lal25g0535 561 MobiDBLite consensus disorder prediction 10 41 - -
Lal25g0535 561 Coils Coil 409 429 - -
Lal25g0535 561 MobiDBLite consensus disorder prediction 1 41 - -
Lal25g0535 561 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 384 447 IPR004827 GO:0003700|GO:0006355
Lal25g0535 561 MobiDBLite consensus disorder prediction 520 561 - -
Lal25g0535 561 CDD bZIP_plant_RF2 387 459 IPR044759 GO:0003700|GO:0006355
Lal25g0535 561 Gene3D - 385 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0535 Lal-Chr25 3864960 3873171 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal25g0535 bZIP_1 2.6e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0548 8 3784668 3788628 Lal25g0535 25 3864960 3873171 LSH
Lal25g0535 25 3864960 3873171 Lal10g0874 10 16256082 16260698 LSH