Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0534 ATGGACCGACGGTGGCCGTGGAAGAGAAAATCAATTGATAAAACTTTGCTTGATAAAGTAGCTACTGAATTGGACTCAGTTGCTTCCACTCAGAGTAATCAGGATTTGGATAGTTTGGGGATCTTTTCTCCCCTAGTCTTGGAAATTTATAAGAAGCCGAACTATGTCCAAATCTCGATGGAATCATATACACATCTGACTGGTTTGGAGGATCAAGTTCAGACATATGAAGAAAAAGTTCAGGAACTGGAGGATGAGATCACAGAATTGAATGAAAAACTGTCAGCAGCGAACTTGGAGATAAATACCAAAGAAACGTTGGTAAAACAACATGCCAAAGTAGCTGAAGAGGCTGTCTCAGTTGAAAACTCTGCAGGATGGGAAAAGGCTGAAGCAGAAGCTTTGGCATTGAAGAACCATCTAGAATCTGTCACTCTCTCAAAACTCACCGCCGAGGACCATGCAGCGCAGTTAGATGGTGCTCTCAAAGAATGTATGCGTCAGGTAAGAAACTTGAAGGAAGAACATGAACAGAAAATACAGGAAGTTGCTCTTGCAAAAACCAAGCAATTAGACAAGATTAAGGGTGAGCTCGAGGCAAGGATAGGTAAGTTTGAACAGGAGCTCCTCATGTCTGCTGCTGAAAATGATGCTCTGTCAAGGTCCTTGCAGGAGCGGTCTAACATGCTGATGAGAGTAAACGAAGAAAAATCTCATGCTGAGGCTGAAATTGAGCATCTTAAGAGCAACATAGAATCATGTGAAAGAGAAATCAATTCTCTTAAATATGAACTTCATCTTATTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGATCTGCAGAAGCTGCTAACAAGCAGCATGTGGAGGGTGTTAAAAAAATTGCTAAGTTAGAGGCAGAGTGTCAAAGATTACGTGGTCTAGTACGGAAAAAGCTACCTGGTCCTGCTGCACTTGCACAAATGAAGTTAGAAGTTGAAAATCTTGGCCGAGAATATGGAGATACTCGATTAAGGAAGTCTCCCGTCAAATCTGCCAATCCTCATCTGTCCCCATTCGCCGAGTTTTCCCTTGAGAATGTACAGAAATTCCAGAAGGATAACGAGTTTCTGACAGAGCGTTTATATGCAGTTGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAATAGTGAACTGCAGGCCTCCAGGAGTATGTGTGCTAAAACACTAGGCAAGCTTCAAATTTTGGAAGCACAAGTGTCGAGTAATCAGCAGAAGGGATCTCCAACATCCATGCATATAACCCATGAAAACATTCACCGTCGAAGCGCAAGCTATGCACCGAGCTTAATCTCAATGCCTGAAGATGGAAATGATGATGCCGTAAGTTGTGCTGATTCTTGGTCTACAGCATTAATCTCTGACTTATTTCAATTCCCAAAAGAAAAGAGTACCGAGTATTTGACCAAATCTGAAGACGCTAAGAAGTTGGAACTAATGGATGACTTTTTAGAGGTGGAAAACTTGGCTCGTTTATCAAATGACTCCCATGGGGATGCATCTGTTCCAGATTTATCAAACAATAAGACATCTGAAATTGTGATCAATGATGTATCAGAAGTCAGCAATGGCAAAGATGATCCCTCTCAAAACAAGAGTGATTCAAATTCATTGCCAAGTCAATTGTCTTCTGGTTCAGAATTGTCTGCACCTGATCACCAATCTGATGTTGATGGCTCATCACAAGCTGTGCTTCGATCAAAAATATTATCAGTTTTTGAGTCTATAGCTGAGGATGCTGATATTGGGAAGATTCTGGAAGATGTTAAACATGTTCTTGAAGAGGCACGTGACACTTCCATCAAACACTCTGTAGCTGTCATTCCCCAGGATGTCAAGCCTTGTGATGCTACGTGTGATAAGCAGGCTAATCTTGAAGATGCCGGTTTAAATACTGCAAATGAACTCATATCTTCCCAACAGCCGGCAGAATCTCTGCCGTTAACTTCAGATCTAGTAGCTGCTGTTTCTCATATTCACAACTTTGTATGCTTCCTTGCCAGAGAAGCAATGGCAGTTCATGACATATCTTCTAATGAAGATGGAATAAGCAAAAAAATGGAGGAGTTCTCTGTCACCTTTAATAAAGTTATAACCAATGACATAAGTTTGCTACAGTTTGTACTTGACCTGTCATATGTTTTAGCTAAAGCAAGTGAGTTCAGATTTAATATCCTTGGTTACAAGGGTACGGAAACTGAAACTAACAGTCCCGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTTCAAAACAGTTCATCCGGAGAAAGACATCAAAATGGTCATTCCCATATTCTTAATCCCTGTTCTGATCCTGAGATTCCTGATGATGGAAATTTGATATCAGACTACGAATCAAATGCTACATCACAAAAGTTCTCGATGGAGGAATTTGAAGAGTTGAAGTTAGAGAAAGAGAAGGCGGTAGACGATCTGTCAAAATGTGCTGAAAAACTTGAAATGACGAAGTCTGAATTACTAGTGACTGAGCAGCTTCTAACTGATGTTAAATCCCAATTGGCTTCTGCTCAAAGATCAAACAGCTTGGCTGAGACGCAACTAAAATGTATGGCAGAGTCTTACAGGTCACTTGAAACACGTGCACTGGAGACTGAAACTGAGCTTAATCGTCTGCAAGTGGAGACTGAAACTCTGGAGAATGAACTGACTCATGAAAAGGGGGCTCATGAAGCAGCTTTGATCAAGTACAAGGAGCTAGAAGAACAATTGCAAAGGTATAAGAGTTCAGCTTCTGATAATGACCATAAGACTAAGCAGGAGAGGGATGTGGCAGCTGCCTCTGAAAAGCTAGCTGAGTGTCAAGAAACCATATATCTTCTTGGCAAGCAGTTAAAAGCTTTGCATCCGCAAACAGAGCCAATGGAATCTTTGTTAGGCGAGAAAGTTCCAATGGTTGAGGGATTCACAGAGCCTGAACCTAATGCTAATAGCCCAAATTTGCAAAAGTTAGATCAAGCCGAGATGGACAGTGCTGCTTCTGTTTTTGTGCAAAGACCAGGTGCAAAGTCCCCATTGCATTTTACTAACGCTTTATATAGCCCCGATAATGAGCCAAACTTTAGAACCATATCTCCAGTACAGCATCCAAAACACAGGCATACCATGTCAGCCTCTTCCTCAGTTTCTTCCACTCCTACACCGGAGAAACGTGCTCGAGGTTTTAGTAGATTCTTTTCATCAAAAGCAAAAGCCGGTCGTTGA 3297 0.4116 MDRRWPWKRKSIDKTLLDKVATELDSVASTQSNQDLDSLGIFSPLVLEIYKKPNYVQISMESYTHLTGLEDQVQTYEEKVQELEDEITELNEKLSAANLEINTKETLVKQHAKVAEEAVSVENSAGWEKAEAEALALKNHLESVTLSKLTAEDHAAQLDGALKECMRQVRNLKEEHEQKIQEVALAKTKQLDKIKGELEARIGKFEQELLMSAAENDALSRSLQERSNMLMRVNEEKSHAEAEIEHLKSNIESCEREINSLKYELHLISKELEIRNEEKNMSMRSAEAANKQHVEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGREYGDTRLRKSPVKSANPHLSPFAEFSLENVQKFQKDNEFLTERLYAVEEETKMLKEALAKRNSELQASRSMCAKTLGKLQILEAQVSSNQQKGSPTSMHITHENIHRRSASYAPSLISMPEDGNDDAVSCADSWSTALISDLFQFPKEKSTEYLTKSEDAKKLELMDDFLEVENLARLSNDSHGDASVPDLSNNKTSEIVINDVSEVSNGKDDPSQNKSDSNSLPSQLSSGSELSAPDHQSDVDGSSQAVLRSKILSVFESIAEDADIGKILEDVKHVLEEARDTSIKHSVAVIPQDVKPCDATCDKQANLEDAGLNTANELISSQQPAESLPLTSDLVAAVSHIHNFVCFLAREAMAVHDISSNEDGISKKMEEFSVTFNKVITNDISLLQFVLDLSYVLAKASEFRFNILGYKGTETETNSPDCIDKIALPENKLVQNSSSGERHQNGHSHILNPCSDPEIPDDGNLISDYESNATSQKFSMEEFEELKLEKEKAVDDLSKCAEKLEMTKSELLVTEQLLTDVKSQLASAQRSNSLAETQLKCMAESYRSLETRALETETELNRLQVETETLENELTHEKGAHEAALIKYKELEEQLQRYKSSASDNDHKTKQERDVAAASEKLAECQETIYLLGKQLKALHPQTEPMESLLGEKVPMVEGFTEPEPNANSPNLQKLDQAEMDSAASVFVQRPGAKSPLHFTNALYSPDNEPNFRTISPVQHPKHRHTMSASSSVSSTPTPEKRARGFSRFFSSKAKAGR 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0534 1098 Pfam Filament-like plant protein, long coiled-coil 104 986 IPR008587 -
Lal25g0534 1098 Coils Coil 886 968 - -
Lal25g0534 1098 MobiDBLite consensus disorder prediction 776 797 - -
Lal25g0534 1098 SUPERFAMILY Tropomyosin 822 982 - -
Lal25g0534 1098 MobiDBLite consensus disorder prediction 1044 1098 - -
Lal25g0534 1098 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1097 - -
Lal25g0534 1098 Coils Coil 66 107 - -
Lal25g0534 1098 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1097 - -
Lal25g0534 1098 Coils Coil 366 386 - -
Lal25g0534 1098 MobiDBLite consensus disorder prediction 1044 1081 - -
Lal25g0534 1098 Coils Coil 823 843 - -
Lal25g0534 1098 MobiDBLite consensus disorder prediction 776 791 - -
Lal25g0534 1098 MobiDBLite consensus disorder prediction 540 583 - -
Lal25g0534 1098 MobiDBLite consensus disorder prediction 521 535 - -
Lal25g0534 1098 Coils Coil 155 189 - -
Lal25g0534 1098 MobiDBLite consensus disorder prediction 516 535 - -
Lal25g0534 1098 Coils Coil 223 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0534 Lal-Chr25 3840209 3846030 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0544 8 3713531 3719904 Lal25g0534 25 3840209 3846030 LSH
Lal25g0534 25 3840209 3846030 Lal4g0073 4 424911 430286 PCT
Lal4g0073 4 424911 430286 Lal25g0534 25 3840209 3846030 PCT