Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0462 ATGAAGATTAAGGATCATGAACGTTTCATTACATCATCATTTCTCAACTTCTTCACTCATATGATAGGGTTTGGTTTTGGTTTACTCATTGGTATTACACTAACTTCATATCTCAGCAAAACCTTTTCTCTCAACTTTCAAATCCAACAATTTTTACTACCTTCTTTAGGAGTCAAACCACAACTTTCACCACCTTTGTTACCACCACCACCACCTGTTATTCCAACAACCTCAACCAATAATATTACTGTTTCAGTGTCCAAAAACCAAACAAAAGTTTCATCAAATGCCAATGAAAAAAGGGTAATCATGAAAAAGTCCAAAACAAGAAAAGGGTTGAGTGATTTTTTGGAGCCTCCAATAGCTATGCATGATATGAGTGAAGAGGAATTGCTTTGGAGGGCTTCTATGGTTCCAAAGATTCAAAAAACACCATTCAAACAAACACCAAAAGTTGCATTTATGTTCTTAACAAAAGGTGCTGTGTTATTGGCTCCACTGTGGGAGAAATTTTTCAAAGGACATGAAGGTTTGTATTCAATTTATGTCCATTCTCAACCTTCATTCACTGAAACATTGCCTCAAACTTCAATTTTTCATGGTCGCAGAATACCTAGCAAGGTGGTAAAATGGGGAGAGAATAGCATGATAGAAGCAGAAAGACGTTTACTAGCCAATGCACTTCTTGATTTCTCAAACCAACGTTTTGTTTTGCTCTCAGAATCATGCATTCCCTTATTCAATTTCTCAACAATATACACTTATCTCATGAACTCAACCAAGTCCTATGTTGAAACCTTTGATATACTTACAAGTGTAGGGCGTGGTAGGTACAATACTGACATGATGCCACAAATTGACCTTTCCCAATGGAGGAAGGGCTCACAATGGTTCCAAATCGACCGCGAACTCGCGGTCGAAATCGTATCGGACGAGATATATTTCCCGGTGTTCATGGAGCATTGTAATCCTCCATGCTATAGCGATGAACATTATATACCAACATTGGTTAATATAAAGTTTTTGAAGAGCACTGCAAATAGGACTTTAACATGGGTTGATTGGTCAAAGGGTGGACCTCATCCATCAAAGTTTATAAGACCAGATGTTACAATTCATTTTTTGAAGGAACTTAGGCATGGAAGTACATGTGATTATAATGGAGAAACCACTAATATTTGTCATTTGTTTGCAAGAAAGTTCACACCTCATGCTTTGGATAGATTGATGAGGTTTACACCAAAGTTGATGCAATTCAATTGA 1263 0.3713 MKIKDHERFITSSFLNFFTHMIGFGFGLLIGITLTSYLSKTFSLNFQIQQFLLPSLGVKPQLSPPLLPPPPPVIPTTSTNNITVSVSKNQTKVSSNANEKRVIMKKSKTRKGLSDFLEPPIAMHDMSEEELLWRASMVPKIQKTPFKQTPKVAFMFLTKGAVLLAPLWEKFFKGHEGLYSIYVHSQPSFTETLPQTSIFHGRRIPSKVVKWGENSMIEAERRLLANALLDFSNQRFVLLSESCIPLFNFSTIYTYLMNSTKSYVETFDILTSVGRGRYNTDMMPQIDLSQWRKGSQWFQIDRELAVEIVSDEIYFPVFMEHCNPPCYSDEHYIPTLVNIKFLKSTANRTLTWVDWSKGGPHPSKFIRPDVTIHFLKELRHGSTCDYNGETTNICHLFARKFTPHALDRLMRFTPKLMQFN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0462 420 PANTHER CORE-2/I-BRANCHING ENZYME 13 419 - -
Lal25g0462 420 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 13 419 IPR044174 GO:0016757
Lal25g0462 420 Pfam Core-2/I-Branching enzyme 152 378 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0462 Lal-Chr25 3171017 3174986 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0972 10 17003005 17006546 Lal25g0462 25 3171017 3174986 ECH
Lal25g0462 25 3171017 3174986 Lal25g0462 25 3171017 3174986 ECH
Lal8g0437 8 2936695 2941188 Lal25g0462 25 3171017 3174986 LSH
Lal25g0462 25 3171017 3174986 Lal10g0972 10 17003005 17006546 LSH
Lal16g1003 16 6657327 6661856 Lal25g0462 25 3171017 3174986 PCT
Lal25g0462 25 3171017 3174986 Lal16g1003 16 6657327 6661856 PCT