Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0148 ATGGTTTTCTCTTCCATTCCACTCTATTTAGATCCCTCCAATTGGCACCAGCAACCACATCAACATCATCAACCAAATGTTACTTCCAATCCTCAACTTCTTCCATCATTACCACCACAGCCAGAAGGTTCTCGCTATGGTGGTGAGTCAATTAGGCCTGGTCCGATAGCGGATCAAGGAACGCAATTAACTAAGATGGCACTACCGGATCAGGCCCCTCAAAAGTGTCCACGGTGTGAATCCACCAATACAAAATTTTGCTACTACAACAATTACAACCTCTCCCAACCAAGACACTTTTGCAAGACATGTAGGCGTTATTGGACAAAAGGTGGTGCTCTTAGAAACGTTCCCGTTGGTGGAGGATGTAGAAGAAACAAGAAGAACAAAAGGAGTAGTAGCTCCAAATCTCCATCATCCATTGATAAAAACTCATCACTATCAAATTCTATAAGTGCAACAAACCCTTTAGGCATAAGTACCCCTGACCTAATTGGTCGGTTCCCTCAGCAACCAAGTAACCATCATCAACCTTTCATGGCTTCTCTTCAGAACATGAACCGTTATGGTGTGGGAAACATAAGCAGCACCAATCACATGGAGTTTCAAATGGGTGGTCGTGGTTTAACTTCAGTAGGAGGAGGAGGAGGAGGAGTCTTTCAACACTTTCCTTTTTTGAATGGTTTTGAGTCAACTTCAGCTGTTTCATACCCTTTTCAGAGTGAGAATGTTGAAGCACCATATGGTTTGGTTAAATTTGAAGATCTAAATCCTTCAAGAAACCCTTTGAGCGGTGTATCAGAAAATAATAACCAATATTATTCATGGACTGATTTATCAGGTCTTGCCTCTTCTTCCACGACTCATCTTTTGTAA 876 0.4189 MVFSSIPLYLDPSNWHQQPHQHHQPNVTSNPQLLPSLPPQPEGSRYGGESIRPGPIADQGTQLTKMALPDQAPQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRRNKKNKRSSSSKSPSSIDKNSSLSNSISATNPLGISTPDLIGRFPQQPSNHHQPFMASLQNMNRYGVGNISSTNHMEFQMGGRGLTSVGGGGGGVFQHFPFLNGFESTSAVSYPFQSENVEAPYGLVKFEDLNPSRNPLSGVSENNNQYYSWTDLSGLASSSTTHLL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0148 291 MobiDBLite consensus disorder prediction 14 31 - -
Lal25g0148 291 MobiDBLite consensus disorder prediction 118 155 - -
Lal25g0148 291 MobiDBLite consensus disorder prediction 14 58 - -
Lal25g0148 291 MobiDBLite consensus disorder prediction 133 155 - -
Lal25g0148 291 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 259 IPR045174 GO:0003700|GO:0006355
Lal25g0148 291 ProSitePatterns Zinc finger Dof-type signature. 76 112 IPR003851 GO:0003677|GO:0006355
Lal25g0148 291 ProSiteProfiles Zinc finger Dof-type profile. 74 128 IPR003851 GO:0003677|GO:0006355
Lal25g0148 291 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 14 259 - -
Lal25g0148 291 Pfam Dof domain, zinc finger 73 128 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0148 Lal-Chr25 937322 938967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0148 1 130 C2C2-Dof Transcription Factor Family AT2G37590 55.102 1.75e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal25g0148 zf-Dof 3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0148 - - gmx:100816635 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0148 25 937322 938967 Lal25g0148 25 937322 938967 ECH
Lal25g0148 25 937322 938967 Lal10g1261 10 18816409 18818922 LSH
Lal25g0148 25 937322 938967 Lal2g0234 2 1368235 1369921 PCT
Lal25g0148 25 937322 938967 Lal9g0229 9 1401218 1404437 PCT
Lal2g0234 2 1368235 1369921 Lal25g0148 25 937322 938967 PCT
Lal9g0229 9 1401218 1404437 Lal25g0148 25 937322 938967 PCT