Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0019 ATGAATGCACACCCAAATTTTGACTCCTTCAATCATTCCCCAGAGTTAACTGTTCGCCATGACTTACGTAATTCTACTTTGGACCCTGATCTGGAGCAGCATAAACTAATAGAAACATTTTTTGTTGGTACAAACAATCATTCATTTACAGATCAGGAGAATGATTCACACATATCTCCTAATGAAAAACTCCTTCATGGACTTCTCCCTTCCACATTTGATGATGAAGAATCGGGATCGGGATCGGGATCGGGATCGGGATCGGGATCAGGATCGGGATCGGGATCGGGATCGGGATCGGGATCAGGATCAGGATCAGGATCAGGATCAGGATCAGGATCAGGATCAGGATCAGGATCATGCCTAAGTAGGTATGAATCTTACTTATACCGCAAACCTTCTCCTCATAAACCCACTCCATATCTCATATCCAAACTCCGAAACTACGAACATCTTCATACTATTTGTGGACCTCATACCCACTCATACAACATATTCATCACAAAGGATCCAACATTTACCCAAAACCATCATGCCACTACTAACTGCAAATACCTTCTATGGACACCTTCCAATGGCTTAGGCAACAGAATGCTAACTTTGGCTGCTGCATTCCTTTATGCTATCCTCACTCACCGTGTTCTCCTTGTTAAATTTGGGAATGATATGCTTCCTCTCTTTTGCCAGCCATTTCCTCATTCCTCATGGTTATTGCCAACGGATTTTCCTTATTGGAAATATCTTAAACGAATCCAAACATATGAAAATTTCCTAATCAAACACAGGGGAAACAACTCGAAGGAGATTTTGCCATCATTCCTTGTTCTTAATCTACAACACACTCATGATGCTCATAATAACTTTTTCCATTGTGATCATAGTCAAGAGCTTCTGCACAAAGTTCCCGTGCTGATTTTGTCATCAGATCAGTATTTTGTCCCTTCTCTTTTCATGATTCCATCATTCAGACAAGTTCTAAGCAAAATGTTCCCTGAAAAAGATACAGTTTTTCACCATATGGGACGTTACCTTTTTCATCCATCAAATGAGGCATGGGAAGTTATTACCAAGTTTCATCAGGCACACTTTGCCGAGGCAAATGAGAGGATTGGCGTGCAGATTAGAGTATTCAACACTCATAAAGCGCCACATCAAACTATAATCAATGAAATTATAGCCTGCACTGTTAAGCATAAGCTGCTCCCTGAATTAGACTTGCAAAAGCCAGCAGAAGCAGCTTCTGTTTCGAAGAACCAGACCTCAAAAGCTGTTCTGGTAGCATCTTTGTTCTCAGAATATGGTGAGAAGCTGAGGGCTTTGTATCTGAGAAATACAAGTGTGACCAATGAAGTGGTAAGAGTTTATCAGCCAAGTCATGAAGAGAGACAAAAGTCAAGTAATGGAATGCACAACATGAAGGCATGGACTGAAATATATCTGCTCAGTTTGTGTGATTCATTGATTACTAGCCGCAAGTCAACTTTTGGATATGTTGCTCAAAGTCTTGGAGGTTTGAAACCATTGATTCTACAGAGGGCATTTGGTGAAACCATCCCAAATCCACCTTGTCAGAGAGCCAGGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGATTGTAGCAGGTCCAATACACCAGTTGATTTTACTTCCCTTTTTCATCATATGATGCATTGTGAAGATGTAAGTAGTGGGTTGAGAATGGTTAATGTTAAACACTAG 1725 0.4087 MNAHPNFDSFNHSPELTVRHDLRNSTLDPDLEQHKLIETFFVGTNNHSFTDQENDSHISPNEKLLHGLLPSTFDDEESGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSCLSRYESYLYRKPSPHKPTPYLISKLRNYEHLHTICGPHTHSYNIFITKDPTFTQNHHATTNCKYLLWTPSNGLGNRMLTLAAAFLYAILTHRVLLVKFGNDMLPLFCQPFPHSSWLLPTDFPYWKYLKRIQTYENFLIKHRGNNSKEILPSFLVLNLQHTHDAHNNFFHCDHSQELLHKVPVLILSSDQYFVPSLFMIPSFRQVLSKMFPEKDTVFHHMGRYLFHPSNEAWEVITKFHQAHFAEANERIGVQIRVFNTHKAPHQTIINEIIACTVKHKLLPELDLQKPAEAASVSKNQTSKAVLVASLFSEYGEKLRALYLRNTSVTNEVVRVYQPSHEERQKSSNGMHNMKAWTEIYLLSLCDSLITSRKSTFGYVAQSLGGLKPLILQRAFGETIPNPPCQRARSMEPCFHYPPKYDCSRSNTPVDFTSLFHHMMHCEDVSSGLRMVNVKH 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0019 574 MobiDBLite consensus disorder prediction 70 118 - -
Lal25g0019 574 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 118 573 - -
Lal25g0019 574 Gene3D - 351 511 - -
Lal25g0019 574 Pfam Xyloglucan fucosyltransferase 116 541 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lal25g0019 574 PANTHER FUCOSYLTRANSFERASE 2-RELATED 118 573 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lal25g0019 574 Gene3D - 180 225 - -
Lal25g0019 574 MobiDBLite consensus disorder prediction 75 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0019 Lal-Chr25 150581 156709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0019 109 570 Xyloglucan Fucosyltransferase1 AT2G03220 48.394 2.77e-151 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0019 K13681 - gmx:100799776 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0019 25 150581 156709 Lal20g1257 20 17079518 17082327 PCT
Lal25g0019 25 150581 156709 Lal1g1214 1 13385449 13388148 PCT
Lal25g0019 25 150581 156709 Lal18g0034 18 226284 229027 PCT
Lal20g1257 20 17079518 17082327 Lal25g0019 25 150581 156709 PCT
Lal1g1214 1 13385449 13388148 Lal25g0019 25 150581 156709 PCT
Lal18g0034 18 226284 229027 Lal25g0019 25 150581 156709 PCT