Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0841 ATGGGGCAAGAAGGAGTTAGAGGAAAAGAAACAGACATGCCTAAGTGGCAACGTCAGGGTTGGAGACAGAATGAGATGCAACAACCCCAAAAGTGTCCACGTTGTGAGTCTCTGAATACTAAGTTCTGTTATTACAACAACAATAGCTTAACACAACCTCGTTACTTCTGCAAAACTTGTAGAAGACACTGGACCCTAGGTGGAACCTTGAGAAGTGTACCCTTTGGTGGTACATGTCGTAAGAGAAAGAGTGCAAGAAATTCTTCATATTCCGGCCAGTTCAGGCAACCACCACCACCACCATCACATGAGGGTTTTGTCCAAACCCAGCATGCAAACTTAACAACAATGGTGAATGCTAAAACCCGTTCTTCCATGGCGGGTTCTTCAACAAATCCCTTATATCTAGGTGGTGATGGGTACTTTTCTTCTCTAGCTAAAATTCATTCCATGAACCATTTACAATCAAAAGCTTTTGACCAGTCTCTGAAACTTAGAAGTGATGTTATTGGTTCTTCTTCTATTTTGGGTCATGCATCTACTTTCAATGGTGGTTATCCTGCACCACAATACCAAATTCGACCATCACAATTCTATCAAATGGGTAGCAGAGAAAGGGAAGCACTTTCACTATATATGGCAAAACAAAGTTTAACTATTCCATCAAACATGGCTAATAGAAATAACAACCCTACTTCTCATAATGATTGGACTCACAGTTTCATCAATGATGCTAATAATAGGTCTTCTGACACATTTCCATGGAGTAACATCAATGATGCTAATAATAGGTCTTCTGACGCATTTCCATGGAGTAACATCAACAACACATACTTTGGTGGTAACACTGAGAGAAATACTGATGCTGTTGGTTCATCACCATTGATCCAAAATCAGTGGCCTGCTTTTCCAGGATATGGTCCTGTTCCTTGA 933 0.4051 MGQEGVRGKETDMPKWQRQGWRQNEMQQPQKCPRCESLNTKFCYYNNNSLTQPRYFCKTCRRHWTLGGTLRSVPFGGTCRKRKSARNSSYSGQFRQPPPPPSHEGFVQTQHANLTTMVNAKTRSSMAGSSTNPLYLGGDGYFSSLAKIHSMNHLQSKAFDQSLKLRSDVIGSSSILGHASTFNGGYPAPQYQIRPSQFYQMGSREREALSLYMAKQSLTIPSNMANRNNNPTSHNDWTHSFINDANNRSSDTFPWSNINDANNRSSDAFPWSNINNTYFGGNTERNTDAVGSSPLIQNQWPAFPGYGPVP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0841 310 MobiDBLite consensus disorder prediction 77 106 - -
Lal24g0841 310 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Lal24g0841 310 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 19 308 - -
Lal24g0841 310 MobiDBLite consensus disorder prediction 1 25 - -
Lal24g0841 310 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Lal24g0841 310 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Lal24g0841 310 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 308 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0841 Lal-Chr24 6727979 6728911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0841 31 107 C2C2-Dof Transcription Factor Family AT5G60200 64.935 2.44e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal24g0841 zf-Dof 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0841 - - lang:109329186 261.922