Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1356 ATGCCGTCGTCGGAATTTGCCGAAATCCACCGACCAATGAAGCCTCACAATACTGAAACTCACCAACCGGGACAAGAGAGCCTCCCATGTCCACGCTGTGACTCCATCAACACCAAGTTCTGCTATTACAACAACTACAACCTCTCACAGCCACGTCACTTCTGCAAGGCATGTCGTCGCTACTGGACTCACGGCGGCACCCTCCGTGACATTCCCGTTGGCGGTGGTACCCGCAAGAATGCAAAGCGCTCACGCACTCTCTCTTCAAATACAACAGTGACTTCTTCTGTTCGGGACCACACAGCGTTGGTCCCTTTCCCTGCAACGACTCAGGGATCAACGATCCAAGCAAATCATGTGAGTGTGTGTGGGCCTGGGGGCTTTACTTCGTTGCTCACCAATGAGCTTGGGCATGAAGATGTTGGATTTGATATGGGGAGAGTTGGCTGGGCTTTCACAGAGATAGTGGATGGCACCAACAATGGCGGTGGTGTTGCGGTTGCGGCTTCTGGTGTTGGGAACATGTGGCAGTTTGAAAGCGGTGTGGACAGTGGATTTATTGGCGGAGAATGCTTCTCTTGGCCTGGACTCGCAATTTCAACACTCGGATACGTGACTGGTGTGAGTGATTTTACTAGTAAACTCATGTGA 651 0.5177 MPSSEFAEIHRPMKPHNTETHQPGQESLPCPRCDSINTKFCYYNNYNLSQPRHFCKACRRYWTHGGTLRDIPVGGGTRKNAKRSRTLSSNTTVTSSVRDHTALVPFPATTQGSTIQANHVSVCGPGGFTSLLTNELGHEDVGFDMGRVGWAFTEIVDGTNNGGGVAVAASGVGNMWQFESGVDSGFIGGECFSWPGLAISTLGYVTGVSDFTSKLM 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1356 216 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Lal23g1356 216 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 202 - -
Lal23g1356 216 MobiDBLite consensus disorder prediction 73 94 - -
Lal23g1356 216 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 202 IPR045174 GO:0003700|GO:0006355
Lal23g1356 216 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Lal23g1356 216 MobiDBLite consensus disorder prediction 1 28 - -
Lal23g1356 216 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1356 Lal-Chr23 14325516 14326367 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1356 1 203 C2C2-Dof Transcription Factor Family AT3G50410 43.307 3.41e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal23g1356 zf-Dof 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1356 - - gmx:778099 213.001