Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1353 ATGGGATTATCTGACATAGATCTTCAAGAAATAAAGAAGATGATCCCAGAACTGTTGGCTGGTGCTAGTCTCATTGCAGAAGAAAGGAAAATCTCCATTAACGGAGGAGGAGTTCTGCTTCCATCCACAGTACCATCTTCTACTTTTCACTCTTCTTCACACTCTCCTTCTAATTCCACAACCAATGTTACTGCCACCACTAATGTTGGCTCCTCTGACAACCAAAATTTGAGGTGCCCACGATGTGATTCACCAAACACAAAGTTCTGTTATTACAACAACTACAACCTCACTCAGCCTCGCCATTTCTGCAAGACATGTCGCCGCTACTGGACCAAAGGAGGTGCTCTGAGGAATGTTCCGATTGGAGGTGGCTACAGGAAAAGCAAGAACGTGGTCGTGTCAAATTCGGCGGCGAAATCCGCCACCACAAAGATGAAAACAGTGGCATCAGAGACTGGAAGATCAGGGGTTGGTCCTGCAGGGTTTTTTCACGAGCTCATGACAAGCCCAATCCAATGGGGTTCTCCACAGAATACTCATATATTGGCTTTACTCAAAGGTAATACTCAAAACCAAAACCCTATCCCTAACCCTAGTTCCGTGTCCTTTAATGATGATGAGGTCAAAGAAGAAGGGAACTTCATGGGGTCTCAGTCCCACATGATGACTGATCCATTCATTGCAAATTTGAATCCTAGAACCCTAGGGCATGATGGTGTTGGACAAGTTCCTTCAATGGGGTTTGGCAGCACATTTTGGAGAAGCAGTAATCAAAATCAACCTCAACAGCATAATAACGGCTTTGTACTTGGGGAACATCAAAACATGAGTGGAATTCAAGAACTTTACCACAAGATCAGGTCATCATCATCAGGTAATTATTGCAGTGATATCTCATCACCCATGTTTGTGGGGAACGTGGCTTCTTCATCTTCTTTATCCTACATTTTGGAGTCACCTTCAGTTGCTGGTAGTGAATTGGGGAGCTGGAATCCAACCCTTTCTTGGTCCGATCTTCCCACAAGCAATGATGCATATCCTTAA 1047 0.4422 MGLSDIDLQEIKKMIPELLAGASLIAEERKISINGGGVLLPSTVPSSTFHSSSHSPSNSTTNVTATTNVGSSDNQNLRCPRCDSPNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGYRKSKNVVVSNSAAKSATTKMKTVASETGRSGVGPAGFFHELMTSPIQWGSPQNTHILALLKGNTQNQNPIPNPSSVSFNDDEVKEEGNFMGSQSHMMTDPFIANLNPRTLGHDGVGQVPSMGFGSTFWRSSNQNQPQQHNNGFVLGEHQNMSGIQELYHKIRSSSSGNYCSDISSPMFVGNVASSSSLSYILESPSVAGSELGSWNPTLSWSDLPTSNDAYP 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1353 348 MobiDBLite consensus disorder prediction 45 74 - -
Lal23g1353 348 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Lal23g1353 348 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 45 345 IPR045174 GO:0003700|GO:0006355
Lal23g1353 348 Pfam Dof domain, zinc finger 75 131 IPR003851 GO:0003677|GO:0006355
Lal23g1353 348 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Lal23g1353 348 PANTHER F-BOX FAMILY PROTEIN 45 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1353 Lal-Chr23 14311167 14312852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1353 73 159 C2C2-Dof Transcription Factor Family AT1G51700 62.069 3.44e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal23g1353 zf-Dof 1.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1353 - - gmx:778100 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0151 15 1055207 1062236 Lal23g1353 23 14311167 14312852 LSH