Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0886 ATGGGTCTCGTTTCGAGTCAACGAGACTCAAGAACAGAGACGATGATCCAAGAAGGTTTACCGGTTACCATTTCATCAATTGGTGGAGCTGTTCCGAAGAAGAAATTGTCGAATTTATTGCCTCTTTTTGTGGCCCTTGTTGTGATTGCAGAGATCGCGTTTCTGGGTAAGCTTGATACGGCGAAGAACGCAGCCATGGTTGATACCCTCGCTGACATGTTATACGAGTCGCGGATGCTGGTCGAAGGTGGTGGTGGTGGTGATGATGATTCGCCGTTATATGCGATGAGCATTGTTCAGAATCCGATATCTGAGAGCTGTGAGGAATGGTTGGAGAGAGAGGATGATGTTACATATTCAAGGGATTTTAAAAAGGAACCTGTTTTTATTTCTAGAGCTACCCAGGAGTTGAATTCGTGTTCAGTGGGATGTAAATTTGAGTTTAATGGGGCTAAAAAACCTGATGCTGCATTTGGAACACCTCAACAAGCTGGAACAGCAAGTGTTCTGAGATCAATGGAATCAGCTGAGTACTATCACGAGAACAATATTGCCATGGCACGACGGTGGGTAAGCACTATCATAAAGAGAGGATATAATATCATAATGACAACCAGTCTATCATCCGATGTTCCTGTTGGATATTTTTCATGGGCTGAGTATGACATCATGGCACCGGTAAAGCCAAAAACTGAAAGTGCTCTTGCAGCTGCATTCATTTCCAATTGTGCTGCTAGAAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAAAAGAAAACATCAAGATTGATTCTTATGGTGGTTGTCATAGGAACAAAGATGGAAGAGTGAACAAAGTGGAAACCCTGAAGCGCTACAAATTTAGCTTAGCATTTGAAAATTCTAACGAGGAGGATTATGTAACTGAAAAGTACTTCCAATCCCTAGTTGCTGGAACTGTCCCTGTGGTTGTCGGTGCTCCAAATATTGAGGATTTTGCTCCTTCTCCTGGTTCAGTTTTACATATTAAAGATATAGAAGATGTTGAGTCCATTGCCAAGACCATGAAACATCTAGCAGAAAATCCTGAAGCATATAATCAATCATTGAGGTGGAAGTATGAAGGCCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCTGCTGTGCATTCATCTTGCCGCCTTTGCATTCATGTGGCCACAATGATTAGAGAGAATGAAGAAAAGAGTCCAGGCTTTAAGAAACGCCCATGCAAGTGCACTAGAGGGTCAGAAACTGTATATCATATCTATGTGAGAGAAAGGGGAAGATTTGAGATGGAGTCCATTTACTTGAGGTCTAGCAATTTAACACTGGAGGCCTTGAAGTCCGCAGTTGCTTTGAAGTTCAAATCCCGGAATCACGTACCTATATGGAAACCAGAAAGATCTGAAATTCTTAGGGGAGGCAATGACTTGAAAATTTACAGAATATACCCTCTTGGCTTGACTCAGAGACAGGCCCTTTATTCCTTCAGCTTCCAAGGGGATGTGGATTTCAAGAGTCACTTAGACATCAATCCTTGTGCAAAGTTTGAAGTCATTTTTGTGTAG 1575 0.4241 MGLVSSQRDSRTETMIQEGLPVTISSIGGAVPKKKLSNLLPLFVALVVIAEIAFLGKLDTAKNAAMVDTLADMLYESRMLVEGGGGGDDDSPLYAMSIVQNPISESCEEWLEREDDVTYSRDFKKEPVFISRATQELNSCSVGCKFEFNGAKKPDAAFGTPQQAGTASVLRSMESAEYYHENNIAMARRWVSTIIKRGYNIIMTTSLSSDVPVGYFSWAEYDIMAPVKPKTESALAAAFISNCAARNFRLQALEALEKENIKIDSYGGCHRNKDGRVNKVETLKRYKFSLAFENSNEEDYVTEKYFQSLVAGTVPVVVGAPNIEDFAPSPGSVLHIKDIEDVESIAKTMKHLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHVATMIRENEEKSPGFKKRPCKCTRGSETVYHIYVRERGRFEMESIYLRSSNLTLEALKSAVALKFKSRNHVPIWKPERSEILRGGNDLKIYRIYPLGLTQRQALYSFSFQGDVDFKSHLDINPCAKFEVIFV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0886 524 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 35 501 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lal23g0886 524 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 134 401 - -
Lal23g0886 524 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 233 396 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lal23g0886 524 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 35 501 - -
Lal23g0886 524 Gene3D - 176 373 IPR038577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0886 Lal-Chr23 11142658 11150035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0886 1 524 Xyloglucan Fucosyltransferase1 AT3G19280 63.894 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0886 K00753 - gmx:100776065 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0706 15 4915853 4922764 Lal23g0886 23 11142658 11150035 LSH