Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0870 ATGGGAATACCTGATAATTCATTACTAGATCTAATAGAAAAGATTAGGTCTTGGGTTTCTTGGGGAGAAAGTGATTTGTCTTGTGTATGTGAGAAATTTGATATGAACAAAAGTGGTTGCAAAATGTGTTGTCACTGCAATAAGAACTTGGATGAGTTGATGACTCAGCATAAATACAATTGCAAAGGTTGCGGTCGTTGGATTTGTGGAGAGTGTATAAGAGGTTGTGGTCTTGTTCCAAATATTGGTTCTGATAACAATACTGGAATCAAGGAAACCGTTAGTTGCAAGTTCTGTTCAGATGATGCTAATAGGAAGAGTAGTGAGAAAGTGCACCCTTCGGCTTCTCCACAAGAGAGTCCAAGACAATGTTCCGAGCCACTTTCACCATGTTTTGGTGTTGAAAGTGAAAGAATTACTTCCCCGGAGAATAGTGAATTGAGTCGGGGAAATCGCTTTGAAAGCTATTTACAATACCAAGATTGTGGGTATTATCCTCACTCCATGACCAATAGGAGTACGACCTCATTTGGTACTCACCCTTCTTCAGTATCTACTCATCCATCTACCTTCAGGACTGACGAAAAAGGGACTGAGGATTCTGGGAAGCAATTTCTCAACCCATCACATACATTTTGTGACAATTATTCAGATAAAGATTTAAGTAGCATTAGTGCTAGACATGACATTCATAACTATAATTCTGTGGGGTCATGTCCTTCAGAGAGCCCCTCTAGGAATGGTTTTACTTCTAGTAGGTTGGAGCAGCTCCCTGTACAGAAGGGGCAAGAGAAAAACCCCACCTCTCAGTATGATACTCCCATTGGTCAACAAAGTATGGCGGTTTTAAGTAAGCCTGAACCAGGGATTGAGGATGCATATAATACTGCTTACTTTTCTGATGACTTGTCAGTTTTCCAGAACCAGAATGAGAATTCACAAAGGCCATTGGATTTTGAAAACAATGGTCTTATCTGGTTCCCCCCACCGCCTGACAATGAAAATGATGATGCAGATGATAGTTTCTTTGCATATGATGATGAAGATGATGATATTGGCGACTCGGGTGCTTTTTTCTCATCCAGTAGCCTATCTGATATGTTTCCTGCAAAGGAGAAACATAATGAGGAAACCAAAGAACCTTTAGAAACTGCTATACATGGGCATTTTAGAGCTCTAGTTTTACAACTTTTGGAGGGAGAGGGAATTAAAGTTGGTAAGGAAAGTGATTCCGAGGACTGGCTTGATGTAGTTGCAACACTAGCTTGGCAGGCTGCTAACTTTGTGAAACCAGATACAAGAAAAGGAGGCAGTATGGATCCCGGTGATTATGTTAAGGTCAAATGTATAGCATGTGGAAGCCCAAGTGGGAGCACACTTATCAAAGGCGTAGTTTGTACAAAAAATATTAAGCATAAGCGCATGACCTCTCAATACAAAAAGACCAGGCTACTCCTTCTAGGAGGAGCACTGGAATGTCAAAAGGTTCCAAACCAACTGGCTTCGTTTAATACATTATTACAGCAGGAAAATGATATCCTGAAGATGATTGTTTCAAAAATTGAGGCTCTTCGACCGAATGTTCTGCTGGTAGAAAAAAGCGTAGCTCCATACGCCCAGGAATATTTGCTGGCAAAGGAGATCTCTTTGGTATTGAATGTTAAAAGGCCTTTGCTAGAGCGTATAGCTCGATGCACTGGTGCTGTCATCACTCCAACAGTGGATGATTTATCTAAAGCACGCTTGGGGCACTGCGACTTGTTCCGTTTAGAAAGAATTGTAGAAGATCACGAGTCTGCTAATCATTTGAACAGAAAGCCATCCAAAACATTAATGTTTTTTGAAGGTTGTCCTCGGCGTTTGTGTTGCACGGTCTTACTAAAGGGAACATGCCGTGAAGATTTAAAGAAAATTAAGCACGTCGTGCAATTTGCAATTTTTGCAGCCTATCATTTATCTCTCGAGACCTCTTTCCTTGCTGATGAAGGTGCTACCCTACCTAAAATGATAACAAAGCAGTCAACTCATATGCCAGAGAGTATAACTGCTGATACTGATTTAAAGCTTGAAACTTCGGGATCAGCACAAGAGCATCATTATGACCCTAGTTTAAACTCACATACAGGCACCATGGTGGATTATGGGGTTGAGAGTGTACTCTCTGACTCATACTATAATAATTTAACTTCTGATTTCAATGTAGAACCAGATTATTTGAATCAGTGCAATGAATCAGAGGTGGACACTATATCTAATATGAGAGACCTTTTGCAACCAGAGTTGCAGGAAGCCATGGTTGAAGAGGAGAGGGGTTGTGGTGAAGTTGCTGAGCCAATTAAAGACAGGATCAACGACGATGATTTTTCTGGTGAATACTTTTCCACTACTGACAGTCATCAGAGCATACTGGTATACTTTTCTAGTCATTGTGTGTCAAAAGGAGCTGTATGTGAGCGCACTAGATTGCTGCGCATAAAGTTTTATGGTTCTTTTGATAAGCCACTTGGGAGATATCTTCGTGATGATCTGTTTGATGAGACATCTTACTGTCAGTCTTGTAAAGAGCCAGCAGAGGCTCATATCCTTTGTTTTATGCATCAGCAAGGGAATCTTACAATCAATGTTCGACGTCTTCCTTCTGTGAAGTTACCGGGGGAAAAAGATGGAAAGATTTGGATGTGGCACCGATGTCTGAGGTGTCCTCATGTGGATGGAGTGCCACCCGCAACTCGGAGAGTCGTTATGTCAGATGCTGCCTGGGGATTGTCGTTTGGGAAGTTCTTGGAACTTAGCTTTTCAAACCATGCAACTGCTAATCGAGTTGCAAGCTGTGGACATTCTTTGCAGAGGGACTGCCTTCGTTTCTATGGGTTTGGGAGTATGGTAGCTTTCTTCCGATATTCTCCTATTGATGTTCTTTCTGTCCGTCTGCCCCCATCTGTGCTGGAATTTGGTCACATCCAACATGAGTGGATTAGAAACGAGGCAGGAGAGCTTTTTAGTAAAGTGGAAGCCTTGTATGTGGAGATATCAGATGTGCTTGAACGCTTAGAAACAAAGATTTCATCTCCTGGCACAGGGAATGAGCTGTCAGATACCTTTGACATTTTTAACCACGTACTGGAGCTGAAAGATATGCTTCAAAGAGAAAGAACTGATTATCATGAAACTTGGTACATAGAACCTTGTAGAGTGCAAGTGTCGTATAGTTTGCTACAACCGGTCCCAGAGACTCCACAACCAGGGAAGGTGGCTTTGGACATTCTGGAACTAAATTCCTTGAGACGATCACTTCTAATTGGTTCACATGTTTGGGATCACCGGCTAAACTCCTTGGACTCTCTCATTAAAAAAAGTTTAACTTCCAAGGTTAAACCAGTAATTGAATTGTGTGCAGAGGTTAAAGAATTAAGAATTGATTCAATTCACAAGGATCGGAGTCCTGACAGTGTGCTTGAGCAAAACAATCCTAAACCTTTAAAATTGCATGAGTCTGATGAAAGTCATATGGTTGGAGAGCAGGATAACATGCTTGAACCACATGCTTCGGTTGCCTTTACATTATATGATCTTGACGAGGAAGTACGTTTAGATGGTGAATTTGTTGGCAACAGAACATTATCCCAGTGTTTTCCAAAAGAGGAGTCCAATCTTTCTGAGAAAATAGATTCTGCATGGACTGGAACTGATGAAGACCCAACAAATGTTAAACCACTTCGATCTATTTTGCATTCAAATCAAAATGACAACCCTCCCCTTAGAAGGTTGAAGCATCCAATTAGAGTTCAGTCTTTTGATTCGGCATTAAGACTTCAGGAGAGAATGAGGAAGGGTTGGCCCTCTTCATCACATTTTTCGCAAATTAGATCTTTTCATGCTTCTGGAGATTACAGGAATATGATTAAAGATCCTGTCTCTAATGTAGTGGAATCCAACTTTCAAAAGTTGCCATGGGAGACACAGAAGCTAAATTTAATACTGAGCTCAACACCATCATTCATTTCCTCCATGTCTCGCATAGCTGACGGTGCTCGGTTGCTGGTTCCCCAAACACATAATAGTGGTAGAGTTATTGCTGTTTATGACAATGATTACTCCAGCATAATATCCTATGCCCTTAGCTCCAAAGAATATGAAGATTGGGTTTCTGATAAGTCAGATCTACATGGTGGGAACTGGGATGCTCGAGAGAGAAACAGAGATGAGTCAGCTACTTCCAGCTTCTCTGCCGCGTGGGCCTCTCTGGACTTGAATTATATCAATTATGGTAATTATAGGTCTGAACGTGCTGCATCTTCGACTGATTCACTTCTCAAAGACTCCAAAAAACCTTTACACTTACAAGTTTCTTTTGGCGATGATTCTTTGGGTGCTGGTGGTAAAGTGAATTTTTCTGTCAATTGCTATTTTGCAAAGCAGTTTGACTCACTTAGGAGGAAGTGCTGCCCTAATAAAGTTGATTTTGTGCGATCCTTGAGCCGTGGCCAGAGATGGACTGCACAAGGAGGGAAAAGTAATGTATATTTTGCGAAGTCATTGGACGAAAGATTTATTATTAAACAAGTCACAAAGACAGAATTGGATTCCTTCGGAGAATTTTCACCTCAGTATTTCAAATACCTGATGGATTCTATGAACTCTGGAGGCCCAACTTGTCTTGCCAAAATTCTCGGTATTTATCAGGTCATTGTCAAGTACACTAAAGGTGGCAAGGAAACAAAAATAGATTTGATGGTAATGGAGAATCTCTTTTATAATAGAAAGATATCCAGGGTATATGATCTTAAGGGCTCAGAAAGATCTCGGTACAATTCAGATACTACAGGGACAAACAAAGTAATGCTTGACATGAATCTGTTAGAAGCATTGAGAACGAAACCCATATTTCTCGGAAGTAGGGCTAAGCGAAGTCTCGAGAGAGCTGTGTGGAATGACACATCCTTTTTGGCGTCTATTGATGTTATGGATTATTCATTGCTGGTTGGGGTAGATGATGAAAGCAAGGAGCTTGTTATGGGGATCATTGATTTCATGAGGCAATACACATGGGACAAGCATTTGGAAACATGGGTAAAAGCATCTGGGATTCTTGGTGGTCCAAAAAATGCAGCCCCTACAATTGTTTCTCCTAAACAATATAAGAAAAGGTTCAGAAAGGCTATGACTACTTACTTTCTCACCTTACCTCATCAGTGGTCTTCTTGA 5205 0.4098 MGIPDNSLLDLIEKIRSWVSWGESDLSCVCEKFDMNKSGCKMCCHCNKNLDELMTQHKYNCKGCGRWICGECIRGCGLVPNIGSDNNTGIKETVSCKFCSDDANRKSSEKVHPSASPQESPRQCSEPLSPCFGVESERITSPENSELSRGNRFESYLQYQDCGYYPHSMTNRSTTSFGTHPSSVSTHPSTFRTDEKGTEDSGKQFLNPSHTFCDNYSDKDLSSISARHDIHNYNSVGSCPSESPSRNGFTSSRLEQLPVQKGQEKNPTSQYDTPIGQQSMAVLSKPEPGIEDAYNTAYFSDDLSVFQNQNENSQRPLDFENNGLIWFPPPPDNENDDADDSFFAYDDEDDDIGDSGAFFSSSSLSDMFPAKEKHNEETKEPLETAIHGHFRALVLQLLEGEGIKVGKESDSEDWLDVVATLAWQAANFVKPDTRKGGSMDPGDYVKVKCIACGSPSGSTLIKGVVCTKNIKHKRMTSQYKKTRLLLLGGALECQKVPNQLASFNTLLQQENDILKMIVSKIEALRPNVLLVEKSVAPYAQEYLLAKEISLVLNVKRPLLERIARCTGAVITPTVDDLSKARLGHCDLFRLERIVEDHESANHLNRKPSKTLMFFEGCPRRLCCTVLLKGTCREDLKKIKHVVQFAIFAAYHLSLETSFLADEGATLPKMITKQSTHMPESITADTDLKLETSGSAQEHHYDPSLNSHTGTMVDYGVESVLSDSYYNNLTSDFNVEPDYLNQCNESEVDTISNMRDLLQPELQEAMVEEERGCGEVAEPIKDRINDDDFSGEYFSTTDSHQSILVYFSSHCVSKGAVCERTRLLRIKFYGSFDKPLGRYLRDDLFDETSYCQSCKEPAEAHILCFMHQQGNLTINVRRLPSVKLPGEKDGKIWMWHRCLRCPHVDGVPPATRRVVMSDAAWGLSFGKFLELSFSNHATANRVASCGHSLQRDCLRFYGFGSMVAFFRYSPIDVLSVRLPPSVLEFGHIQHEWIRNEAGELFSKVEALYVEISDVLERLETKISSPGTGNELSDTFDIFNHVLELKDMLQRERTDYHETWYIEPCRVQVSYSLLQPVPETPQPGKVALDILELNSLRRSLLIGSHVWDHRLNSLDSLIKKSLTSKVKPVIELCAEVKELRIDSIHKDRSPDSVLEQNNPKPLKLHESDESHMVGEQDNMLEPHASVAFTLYDLDEEVRLDGEFVGNRTLSQCFPKEESNLSEKIDSAWTGTDEDPTNVKPLRSILHSNQNDNPPLRRLKHPIRVQSFDSALRLQERMRKGWPSSSHFSQIRSFHASGDYRNMIKDPVSNVVESNFQKLPWETQKLNLILSSTPSFISSMSRIADGARLLVPQTHNSGRVIAVYDNDYSSIISYALSSKEYEDWVSDKSDLHGGNWDARERNRDESATSSFSAAWASLDLNYINYGNYRSERAASSTDSLLKDSKKPLHLQVSFGDDSLGAGGKVNFSVNCYFAKQFDSLRRKCCPNKVDFVRSLSRGQRWTAQGGKSNVYFAKSLDERFIIKQVTKTELDSFGEFSPQYFKYLMDSMNSGGPTCLAKILGIYQVIVKYTKGGKETKIDLMVMENLFYNRKISRVYDLKGSERSRYNSDTTGTNKVMLDMNLLEALRTKPIFLGSRAKRSLERAVWNDTSFLASIDVMDYSLLVGVDDESKELVMGIIDFMRQYTWDKHLETWVKASGILGGPKNAAPTIVSPKQYKKRFRKAMTTYFLTLPHQWSS 1734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0870 1734 CDD FYVE_like_SF 42 99 - -
Lal23g0870 1734 Gene3D GroEL 456 629 IPR027409 -
Lal23g0870 1734 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1C-RELATED 40 1734 - -
Lal23g0870 1734 MobiDBLite consensus disorder prediction 107 127 - -
Lal23g0870 1734 MobiDBLite consensus disorder prediction 110 125 - -
Lal23g0870 1734 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1501 1668 IPR002498 GO:0016307|GO:0046488
Lal23g0870 1734 SMART PIPK_2 1437 1726 IPR002498 GO:0016307|GO:0046488
Lal23g0870 1734 CDD PIPKc_PIKfyve 1462 1725 IPR044769 GO:0000285
Lal23g0870 1734 Pfam TCP-1/cpn60 chaperonin family 411 666 IPR002423 GO:0005524
Lal23g0870 1734 SUPERFAMILY SAICAR synthase-like 1441 1725 - -
Lal23g0870 1734 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 40 1734 - -
Lal23g0870 1734 Gene3D - 1583 1726 - -
Lal23g0870 1734 SUPERFAMILY GroEL apical domain-like 458 629 IPR027409 -
Lal23g0870 1734 MobiDBLite consensus disorder prediction 173 191 - -
Lal23g0870 1734 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 37 104 IPR017455 -
Lal23g0870 1734 MobiDBLite consensus disorder prediction 173 206 - -
Lal23g0870 1734 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1424 1582 IPR027484 -
Lal23g0870 1734 CDD Fab1_TCP 391 663 - -
Lal23g0870 1734 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1400 1725 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0870 Lal-Chr23 11037067 11045270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0870 1 1734 Acyl Lipid Metabolism Gene Families AT1G71010 51.672 0.0 1657
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0870 23 11037067 11045270 Lal23g0870 23 11037067 11045270 ECH
Lal15g0722 15 5046136 5054403 Lal23g0870 23 11037067 11045270 LSH
Lal14g1625 14 16645623 16656604 Lal23g0870 23 11037067 11045270 PCT