Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0868 ATGGAGCCTAATAATGCAACTAGCATGCATTCTCATTGTGTAGACATAACTATGGAAGTGCACCAAGTTGTTCCACCACCCTACAAGAGCACCCTACAGAAGTTCAAGGCCAGGCTCAAGGAAACTTTTTTCCCTGATGACCCTCTGCGCCAATTCCAAGGACAATCACTTAATAGAAAATTAATACTTGGAGCTCAATATGTGTTCCCTATTCTTCAATGGGGGCCTAATTATACCCTCAAGCTCTTCAAATCTGACTTTGTTTCTGGCCTCACTATTGCTAGCTTGGCCATCCCACAGGGAATCAGTTATGCTAAGCTAGCAAATCTTCCTCCAATTGTTGGACTATATTCTAGTTTTGTTCCACCACTTGTTTATGCTGTTCTTGGAAGCTCAAGGGACCTAGCAGTAGGACCTGTTTCTATTGCTTCTCTTGTTATGGGATCCATGTTAAGGCAAGAAGTGTCTCCTACACTAGACCCTCTTCTGTTTCTTCAGCTAGCTTTCACTTCAACATTTTTTGCTGGTATCTTCCAAGCTTCTCTTGGAATTCTAAGGCTAGGATTTATAATTGATTTTCTATCTAAGGCCATTCTTATTGGGTTCATGGCTGGAGCTGCTATAATTGTATCTTTGCAACAACTCAAGAGCCTCCTTGGAATCACACATTTCACTAATCAAATGGGTTTGATTCCTGTTATGAGTTCTGTTTTTCATAATATACATGAGAGCATTAGGAAACCAAAACTTTTCTGGGTATCAGCTGGAGCACCACTTGTATCAGTAATCATCTCTACTCTTCTGGTTTTTGCAATCAAGGGTCAAAAACATGGCATTAGTGTAATTGGAAAATTGCAACAAGGAATAAATCCTCCTTCATTGAATATGTTACGCTTTCATGGAACTTACCTAGGCCTAGTCATGAAAACAGGACTTATCACTGGCATTTTATCCCTTACTGAAGGAATTGCAGTAGGAAGGACATTTGCAGCTCTCAGAAATTACAAAGTTGATGGAAACAAGGAAATGATTGCAATCGGATTTATGAATGTGGTTGGCTCCTCCACTTCCTGCTATGTTACCACAGGTGCTTTCTCTCGTTCAGCTGTTAATAACAATGCAGGTGCAAAAACAGCAGTGTCAAATATTGTGATGTCTGTGACAGTCATGGTGACACTCCTTTTCCTTATGCCATTGTTCCAATACACTCCTAATGTTGTTTTGGGTGCAATCATAGTCACAGCAGTAATTGGCCTCATTGATATCCCTGCTGCTATTCACATTTGGAGGATAGACAAATTCGATTTCATTGTGATGTTGGTTGCATTCTTCGGTGTTATCTTCATCTCTGTTCAGCTTGGTCTTGCTATAGCAGTTGGGTTGTCAACTTTTAAGATACTCCTGCAAATTACAAGGCCTAAAACAGTAATGCTGGGGAAGATACCAGGGACAGATATATATAGAAATCTTGATCAATACAAGGAAGCAGAAAGAATACCTGGTTTTCTCATTTTAAGCATTGAGGCTCCCATCAATTTTGCTAACATCACATATCTCAATGAGAGGACATTAAGATGGATTGAAGAAGAAGATAACATAAAGGAACACTCAAATCTCCGATATATTATCCTCGAGATGTCAGCTGTGAGCGCCATCGACACAAGTGGAATCTCATTTTTCAGGGAGTTAAAATCAACACTAGAAAAGAAGGGCGTTGAGCTTGTCTTGGTGAACCCACTCGGCGAGGTCATAGAAAAACTGAAAAAAGCAGATGAAGATAATGATTTCATCAGAACAGATAACCTTTTCTTGACAGTTGGAGAGGCTGTAGCTTCACTTTCATCAACAATGAAAAGCCAATCATCAACCATGACAGAAGGGGCACAAACAATTGTGGCACATTACTGA 1908 0.4004 MEPNNATSMHSHCVDITMEVHQVVPPPYKSTLQKFKARLKETFFPDDPLRQFQGQSLNRKLILGAQYVFPILQWGPNYTLKLFKSDFVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVMGSMLRQEVSPTLDPLLFLQLAFTSTFFAGIFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNIHESIRKPKLFWVSAGAPLVSVIISTLLVFAIKGQKHGISVIGKLQQGINPPSLNMLRFHGTYLGLVMKTGLITGILSLTEGIAVGRTFAALRNYKVDGNKEMIAIGFMNVVGSSTSCYVTTGAFSRSAVNNNAGAKTAVSNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAAIHIWRIDKFDFIVMLVAFFGVIFISVQLGLAIAVGLSTFKILLQITRPKTVMLGKIPGTDIYRNLDQYKEAERIPGFLILSIEAPINFANITYLNERTLRWIEEEDNIKEHSNLRYIILEMSAVSAIDTSGISFFRELKSTLEKKGVELVLVNPLGEVIEKLKKADEDNDFIRTDNLFLTVGEAVASLSSTMKSQSSTMTEGAQTIVAHY 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0868 635 Gene3D STAS domain 472 616 IPR036513 -
Lal23g0868 635 SUPERFAMILY SpoIIaa-like 497 613 IPR036513 -
Lal23g0868 635 Pfam STAS domain 493 609 IPR002645 -
Lal23g0868 635 ProSiteProfiles STAS domain profile. 492 613 IPR002645 -
Lal23g0868 635 PANTHER BNAA09G30120D PROTEIN 19 243 IPR030313 -
Lal23g0868 635 PANTHER BNAA09G30120D PROTEIN 242 615 IPR030313 -
Lal23g0868 635 Pfam Sulfate permease family 83 243 IPR011547 GO:0016021
Lal23g0868 635 Pfam Sulfate permease family 247 441 IPR011547 GO:0016021
Lal23g0868 635 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Lal23g0868 635 CDD STAS_SulP_like_sulfate_transporter 493 606 - -
Lal23g0868 635 PANTHER SULFATE TRANSPORTER 19 243 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal23g0868 635 PANTHER SULFATE TRANSPORTER 242 615 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0868 Lal-Chr23 10992240 11001104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0868 2 620 Inorganic Solute Cotransporters AT3G15990 64.752 0.0 822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0868 23 10992240 11001104 Lal23g0868 23 10992240 11001104 ECH
Lal16g0768 16 4971393 4977413 Lal23g0868 23 10992240 11001104 LSH