Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0867 ATGGCCAAGCGTTTGATTCCAAGTCTGAACCGTGTTCTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACCGCCGGCATTCTCCTTCCTGAGAAATCTTCACAGCTTAATTCAGGGAAAGTTGTAGCAGTTGGACCTGGAGCACTAGACAAAGCAGGGAATTTGATTCCAGTGTCGGTGAAGGAGGGCGACACTGTGTTGTTGCCAGAATATGGTGGCACTCAGATCAAGCTTGATGACAAAGAATTCCATTTGTATAGAGATGAAGATATTTTGGGCACTCTGCATGATTGA 294 0.4524 MAKRLIPSLNRVLIEKIVPPSKTTAGILLPEKSSQLNSGKVVAVGPGALDKAGNLIPVSVKEGDTVLLPEYGGTQIKLDDKEFHLYRDEDILGTLHD 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0867 97 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal23g0867 97 PANTHER GROES-LIKE FAMILY PROTEIN 1 97 - -
Lal23g0867 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
Lal23g0867 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal23g0867 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal23g0867 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal23g0867 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal23g0867 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal23g0867 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 97 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal23g0867 97 Pfam Chaperonin 10 Kd subunit 6 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal23g0867 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0867 Lal-Chr23 10979932 10982643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0867 3 96 Calmodulin-binding Proteins AT5G20720 37.500 2.45e-11 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0867 23 10979932 10982643 Lal23g0867 23 10979932 10982643 ECH
Lal16g0769 16 4977858 4978836 Lal23g0867 23 10979932 10982643 LSH