Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0865 ATGTCTGATTCATTTACTACCTTTCACTCTACCACTCCAAATTCTACCCTTAATTCCCTTGCAGCTCCCAGAATCATGACAATCTCCTCAATGGGTCAACCTTATTATATTTGTTCCCAATGCAACCATCTCCTAAACTTCAATAATCCTCATGTTGATCAAGGGACAAGTAATACAGGGTTCAATGTGCAGTCACAGCAAAACACAAGGTGGAGTCCAACACCAATTCAGCTACTAGTCCTTGAGGAATTGTATAGGCAGGGTACAAAGACACCATCATCTGAACAAATTCAACAAATAGCCTCACAATTGTGCCAGTTTGGCAAGATTGAAGGCAAAAATGTGTTCTACTGGTTCCAAAATCACAAGGCTAGAGAGCGCCAGAAGCGTCGTCGCCTGGAGATGAATGAAACTGCTTCTAATGAAGGGTTGAAAGGGACAGGCTATGAAGTTAAAGAGACAAAGAAGTGGGCATCCACTTCTAACTGCAGTGGACATGCTAAGGAATTTGATGCACTGGATATAGCAGAAGAGGGATCAAATTGGTGGACTAAATTTGAAGACAGAAACATACATGTTTTGAGGACAGACATAGCAGAAAAGCCAGCTAGGTATCCAAATATGGAGAAGCCTTGCCTTATTCCTATTACCACAGCATCTACATCTTATGTACCAACACACACAACACATAATACACAAGTTTTGGCCCCTCCAAATTATAATTTACCCGTGGTACTCAACATGGAAAGACTCAACTATTATGATAATGATGAAGAAAATGCATATCCTAGGACACTTGAACTTTTTCCACTTAAGAGTGATGACCAAGATGGCATTTCTCATTCTGAGAGGAAATCTAGATTCTATGCTACCAATGATGCTAATATGGATACTGATGAAATCACCTCCAATCAGTTTTTTGAGTTTCTCCCTTTAAGAAACTGA 945 0.4 MSDSFTTFHSTTPNSTLNSLAAPRIMTISSMGQPYYICSQCNHLLNFNNPHVDQGTSNTGFNVQSQQNTRWSPTPIQLLVLEELYRQGTKTPSSEQIQQIASQLCQFGKIEGKNVFYWFQNHKARERQKRRRLEMNETASNEGLKGTGYEVKETKKWASTSNCSGHAKEFDALDIAEEGSNWWTKFEDRNIHVLRTDIAEKPARYPNMEKPCLIPITTASTSYVPTHTTHNTQVLAPPNYNLPVVLNMERLNYYDNDEENAYPRTLELFPLKSDDQDGISHSERKSRFYATNDANMDTDEITSNQFFEFLPLRN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0865 314 SUPERFAMILY Homeodomain-like 62 132 IPR009057 -
Lal23g0865 314 Pfam Homeodomain 68 128 IPR001356 GO:0003677
Lal23g0865 314 Gene3D - 62 129 - -
Lal23g0865 314 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 40 314 - -
Lal23g0865 314 CDD homeodomain 69 130 IPR001356 GO:0003677
Lal23g0865 314 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 40 314 IPR044555 GO:0003700|GO:0099402
Lal23g0865 314 SMART HOX_1 66 133 IPR001356 GO:0003677
Lal23g0865 314 ProSiteProfiles 'Homeobox' domain profile. 64 129 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0865 Lal-Chr23 10963192 10966668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0865 68 163 Wox Gene Family AT3G18010 55.963 4.84e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal23g0865 Homeodomain 6e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0865 23 10963192 10966668 Lal23g0865 23 10963192 10966668 ECH
Lal16g0770 16 4980680 4983441 Lal23g0865 23 10963192 10966668 LSH
Lal15g0737 15 5177038 5179459 Lal23g0865 23 10963192 10966668 LSH