Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0843 ATGCGCTTAGACTCTTTGAACATTGTTTTTTATGAAGGAGCGGCGGAAGAAGACGGAAAAGGACCATCTGTGTGGGATACTTTTTCCCACATCCCCGGCAAGATAACGGATCTCAGCACTTCTGATATTGGGGTGGATCAGTACCACCGATATGAAGAAGACATACAACTTATGAAAGATTTGGGGACAAATTCATATAGGTTATCTATTTCTTGGCCTCGAATTTTTCCCAATGGATCCGGAGAAATCAACCAGGCAGGAGTGGATCATTATAATAAATTCATCAATGCATTAGTGGCTGCAGGAATTGAACCTTTTGTAACCATCTACCACTGGGACCTACCTCAAGTATTGGAAGACAAATATAATGGATGGCTTAGCAGTGAGATAATAAAGGATTATGCAAATTTTGCCGAGACATGCTTTCAAAAATTTGGGGACAGAGTGAAATTCTGGTTCACAATAAATGAGCCATATACAGTTGCCATACAAGGATATGATGTTGGTGACAAGGCTCCAGGACATTGCTCCATTCTCCCTTTTCCCTTGTTTTGCAAGACAGGAAACTCTGCAATTGAACCTTATATTGTTGCCCACAATTTTATACGTTCTCATGCAGCAGCAACAAATATTTATAGGAAAAAATATAAGGGTATACAGGGTGGATCAATTGGAACAATTTTAAATGCCCTTTGGTTTGTGCCAGCAACAAATATTGAAAGAGACATTGATGCAACTCAAAGAGCCAAAGATTTTATGATTGGTTGGTTTCTTGATCCTTTCATTTTCGGAGATTATCCAAGTTCAATGAAAAATAGAATAGGAATAAGGCTCCCAAAATTCTCTCAAGCCGAGTCAGCTCTAGTTAAGGGTTCATTAGATTTTGTGGGAATTAATCACTTCACCACATATTATGTAAAGGACGATTCTATTAATATCAGTAAAAGAATTCTCAAAGATGCATTGGCAGACACTGGTGTCGTTTTTTTCCCATTCAACGGTACACACTTTATTGGAGAAATTACAAAATCATTATGGGTGTTTATCGCGCCAGAAGGCATCAGAAGCTTAATGAACTATATCAAACTAAAGTATGGGAACCTTCCAATCTTTATCACTGAAAGTGGGTTGAATGATTTATCTAGTAGATTAATCCCAGTGCAGCATGCTTATTACTATTTAAATGATGTGCAACGTATTAGATACCACAGTAGCTATTTACATAGCTTACTGGCTTCTATCAAAGATGGTTGCAATGTGAAAGGATATTTTATATGGTCACTATTAGATAACTGGGAGTGGGACAGTGGATACAATGTTAGAACTGGTCTGTATTTTGTTGATTATACAGACAACTTGAAGAGATACCCCAAAAAATCTGCTGTGTGGTACAAGAACTTCTTGAAACCAACTAATTAA 1419 0.3749 MRLDSLNIVFYEGAAEEDGKGPSVWDTFSHIPGKITDLSTSDIGVDQYHRYEEDIQLMKDLGTNSYRLSISWPRIFPNGSGEINQAGVDHYNKFINALVAAGIEPFVTIYHWDLPQVLEDKYNGWLSSEIIKDYANFAETCFQKFGDRVKFWFTINEPYTVAIQGYDVGDKAPGHCSILPFPLFCKTGNSAIEPYIVAHNFIRSHAAATNIYRKKYKGIQGGSIGTILNALWFVPATNIERDIDATQRAKDFMIGWFLDPFIFGDYPSSMKNRIGIRLPKFSQAESALVKGSLDFVGINHFTTYYVKDDSINISKRILKDALADTGVVFFPFNGTHFIGEITKSLWVFIAPEGIRSLMNYIKLKYGNLPIFITESGLNDLSSRLIPVQHAYYYLNDVQRIRYHSSYLHSLLASIKDGCNVKGYFIWSLLDNWEWDSGYNVRTGLYFVDYTDNLKRYPKKSAVWYKNFLKPTN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0843 472 PANTHER BETA-GLUCOSIDASE 8 468 - -
Lal23g0843 472 Pfam Glycosyl hydrolase family 1 12 469 IPR001360 GO:0004553|GO:0005975
Lal23g0843 472 PANTHER GLYCOSYL HYDROLASE 8 468 IPR001360 GO:0004553|GO:0005975
Lal23g0843 472 Gene3D Glycosidases 9 469 - -
Lal23g0843 472 PRINTS Glycosyl hydrolase family 1 signature 292 306 IPR001360 GO:0004553|GO:0005975
Lal23g0843 472 PRINTS Glycosyl hydrolase family 1 signature 370 378 IPR001360 GO:0004553|GO:0005975
Lal23g0843 472 PRINTS Glycosyl hydrolase family 1 signature 396 407 IPR001360 GO:0004553|GO:0005975
Lal23g0843 472 PRINTS Glycosyl hydrolase family 1 signature 417 434 IPR001360 GO:0004553|GO:0005975
Lal23g0843 472 PRINTS Glycosyl hydrolase family 1 signature 441 453 IPR001360 GO:0004553|GO:0005975
Lal23g0843 472 SUPERFAMILY (Trans)glycosidases 11 469 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0843 Lal-Chr23 10830178 10840149 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0843 23 10830178 10840149 Lal23g0843 23 10830178 10840149 ECH