Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0644 ATGGGTCTTTCTGTACTTGTAGGTGCAACACTAGTTGTATCTGGTGATGGTCGTTATTATTCAAAGGAAGCCATTCAGATCATAACTAAAATGTCAGCAGCAAATGGAGTAAGACGTGTTTGGATTGGTCAAAATGGTTTGCTTTCAACTCCTGCTGTATCTGGTGTTATACGTGAAAGAGTTGGGCCTGATGGGTCAAAGGCAACTGGTGCATTTATACTGACAGCAAGCCACAATCCTGGTGGCCCTAATGAGGCTCTCTCGCATTCTATTTCTGTTACCTTAACTGAGGGTGAGCTTGGCACAATAGTAAAATTGTTGCTTATTGACCATGAGATCACGGGTTCAAATCCTGGAAATAACTTCTCCGCTTGTGGAGACTTTGGGATTAAATATAACATGGAAAATGGTGGACCAGCGCCAGAAGGAATTACTAACAAGATATATGAATACACAACGACAATTAAGGAATACTTTATTGCTGAAGATCTGCCAGATGTGGATATTACCACAACAGGTGTTACAAACTTCACAGGCCCTGAAGGACCGTTTGATGTTGAGGTTTTTGATTCAGCAAGTGATTATGTAAAATTGATGAAGTCAATTTTTGATTTTGAATCTCTCAGGAAACTGCTGTCATCTCCTAAATTTACATTCTGTTATGATGCACTACATGGAGTTGGTGGAGCTTATGCAAAGCGTATTTTTGTGGATGAGCTTGGGGCACAAGAAAGTTCTTTAATCAACTGTATTCCGAAGGAAGACTTTGGAGGAGGACATCCAGATCCCAATTTGACATACGCGAAAGAGTTGGTTGCTCGCATGGGATTGGGCAAATCAGAATCTCAAGGTGAGCCCCCAGAGTTTGGTGCTGCTGCTGATGGTGATGCAGATCGCAACATGATACTTGGAAAAAGGTTTTTTGTCACTCCTTCAGATTCTGTGGCCATCATTGCTGCAAATGCTGTTGAAGCTATACCATACTTTTCTGCTGGCTTAAAAGGAGTCGCCAGGAGCATGCCAACCTCTGCTGCCCTGGATGTTGTAGCCAAAAGCCTAAACTTGAAATTCTTTGAGGTACCGACAGGCTGGAAGTTCTTTGGTAATTTAATGGATGCTGGATTATGTTCAGTCTGTGGTGAAGAAAGTTTTGGAACTGGTTCGGACCATATTCGTGAAAAAGATGGAATCTGGGCAGTTTTGGCCTGGCTATCTATACTAGCATATAAAAATAAAGATAAGCTTGAAGACAAGCTTGTAACAGTTGAAGACATAGTTCGTCAGCATTGGTCTACATATGGGTGCCACTATTATACTCGATATGACTATGAAAACGTAGATGCAGGTGCAGCAAAGGAACTGATGGCATATTTGGTCAAACTGCAGTCCTCACTTTCAGAAGTCAATCAGCTTATTAAGGAAGTAAGGACAGATGTCTCAAATGTCGTCCACGCTGATGAATTTGAATACAAAGATTCCGTGGATGGTTCCATTTCATCACATCAGGGCATCCGATATTTGTTTGAGGATGGGTCACGATTGATTTTCCGCCTTTCTGGAACTGGATCAGAAGGTGCAACTATTCGACTATACATTGAGCAATATGAGAAGGATCCATCAAAGATTGGGAGGCTTTCACAAGATGCACTTGCTCCTCTTGTGGAGGTTGCATTGAAACTATCAAAGATGCAGGAATTCACAGGTCGATCTTCCCCAACAGTCATTACATAA 1731 0.4183 MGLSVLVGATLVVSGDGRYYSKEAIQIITKMSAANGVRRVWIGQNGLLSTPAVSGVIRERVGPDGSKATGAFILTASHNPGGPNEALSHSISVTLTEGELGTIVKLLLIDHEITGSNPGNNFSACGDFGIKYNMENGGPAPEGITNKIYEYTTTIKEYFIAEDLPDVDITTTGVTNFTGPEGPFDVEVFDSASDYVKLMKSIFDFESLRKLLSSPKFTFCYDALHGVGGAYAKRIFVDELGAQESSLINCIPKEDFGGGHPDPNLTYAKELVARMGLGKSESQGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAANAVEAIPYFSAGLKGVARSMPTSAALDVVAKSLNLKFFEVPTGWKFFGNLMDAGLCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKDKLEDKLVTVEDIVRQHWSTYGCHYYTRYDYENVDAGAAKELMAYLVKLQSSLSEVNQLIKEVRTDVSNVVHADEFEYKDSVDGSISSHQGIRYLFEDGSRLIFRLSGTGSEGATIRLYIEQYEKDPSKIGRLSQDALAPLVEVALKLSKMQEFTGRSSPTVIT 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0644 576 Gene3D - 308 406 - -
Lal23g0644 576 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 311 433 IPR005846 GO:0005975|GO:0016868
Lal23g0644 576 Gene3D - 202 307 - -
Lal23g0644 576 PANTHER BNAA09G30060D PROTEIN 117 576 - -
Lal23g0644 576 PANTHER BNAA09G30060D PROTEIN 7 68 - -
Lal23g0644 576 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 117 576 IPR045244 GO:0004614|GO:0005975
Lal23g0644 576 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 7 68 IPR045244 GO:0004614|GO:0005975
Lal23g0644 576 SUPERFAMILY Phosphoglucomutase, first 3 domains 193 308 IPR016055 GO:0005975|GO:0016868
Lal23g0644 576 SUPERFAMILY Phosphoglucomutase, first 3 domains 8 84 IPR016055 GO:0005975|GO:0016868
Lal23g0644 576 Gene3D - 113 201 - -
Lal23g0644 576 Gene3D - 5 88 - -
Lal23g0644 576 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 537 IPR005843 GO:0016868|GO:0071704
Lal23g0644 576 SUPERFAMILY Phosphoglucomutase, first 3 domains 125 223 IPR016055 GO:0005975|GO:0016868
Lal23g0644 576 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 194 303 IPR005845 GO:0005975
Lal23g0644 576 Gene3D - 415 576 - -
Lal23g0644 576 SUPERFAMILY Phosphoglucomutase, C-terminal domain 436 576 IPR036900 GO:0016868|GO:0071704
Lal23g0644 576 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 9 85 IPR005844 GO:0005975|GO:0016868
Lal23g0644 576 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 71 80 IPR016066 GO:0000287
Lal23g0644 576 SUPERFAMILY Phosphoglucomutase, first 3 domains 295 440 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0644 Lal-Chr23 9158316 9164468 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0644 23 9158316 9164468 Lal23g0644 23 9158316 9164468 ECH
Lal16g1001 16 6642913 6649100 Lal23g0644 23 9158316 9164468 LSH