Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1376 ATGATTGCTATATCACTAGGAATACTTATAATTTCAGCTTTATGCTTTTATAACCTAAGTTCAAGTTTACATGCCATTATGTATCCGGTAACAATTCCTTTCAAAACTTTACTTTCACCACCACTGTTACCATCATCGCAATTATCGATAACACCACTACCACCACAGTCACCTTCACCTTCACCACTACATCGAGTATTACCCTATTCATCATGGAACAAAAAGTCAAAAACTTCGGAGATATCGATTTTGCATAACATGACCGACCAAGAGTTGTTCCTTAAAGCATCTATGGTTCAAGGAAATGATGATTTCACTAACAAGACAATCCCAAAGGTGGCTTTCATGTTCTTGATCAAAGGTAAACTACCCTTAGCTCCATTGTGGGAGAAATTCTTCAAAGGCCATGAAGGATTTTATTCTATTTACTTGCACCAAGATCCTTCTTATAAAGACAACGTGCATGAAGATTCTGCTTTCTATGGAAGAAAAATTCCTAGCCAGCATGTTATATGGGGTACTTCTTCAATGATTGATGCTGAAAAACGTCTTCTAGCAAATGCACTTTTAGACTTCTCAAATCAACATTTTGTGCTTCTTTCAGAATCATGCATCCCATTATTTGGCTTCAAAACTATATACACATATCTCATGAACTCAAACCTTAGCTATGTACATTCATTTCATGACCCAACAAAAGATTGCATAGGAAGGTACAACCCAAAAATGTCACCTATAATTAATATAACAAATTGGAGAAAAGGGTCTCAATGGTTTGAATTACACCGTGATTTAGCTATTAACATTGTTGTTGACACAAAATATTATCCTATGTTTAAGAATTACTGTCTTCCAAGATGCTATAGTGATGAACATTATATACCAACACTAGTGCATATTATTTACCCTGAATTAAACTCGAATCGAAGTATTACTTGGGTAGATTGGTCAATTCGGGGCCCTCATCCACGAAGATATGTGTGGGATGATATAACAATTGAAATTATGAGACAAATAAGATTTGGATCAAAATGTGTTTATAATGGGAATATTACTAACTTATGTTTCCTTTTTGGAAGAAAGTTTCATCCCAACACATTGGAGCCTTTACTTAGGATGTCTCCATTTTTGCTTGGTGATTATTATCGACCTTAA 1155 0.3489 MIAISLGILIISALCFYNLSSSLHAIMYPVTIPFKTLLSPPLLPSSQLSITPLPPQSPSPSPLHRVLPYSSWNKKSKTSEISILHNMTDQELFLKASMVQGNDDFTNKTIPKVAFMFLIKGKLPLAPLWEKFFKGHEGFYSIYLHQDPSYKDNVHEDSAFYGRKIPSQHVIWGTSSMIDAEKRLLANALLDFSNQHFVLLSESCIPLFGFKTIYTYLMNSNLSYVHSFHDPTKDCIGRYNPKMSPIINITNWRKGSQWFELHRDLAINIVVDTKYYPMFKNYCLPRCYSDEHYIPTLVHIIYPELNSNRSITWVDWSIRGPHPRRYVWDDITIEIMRQIRFGSKCVYNGNITNLCFLFGRKFHPNTLEPLLRMSPFLLGDYYRP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1376 384 Pfam Core-2/I-Branching enzyme 113 340 IPR003406 GO:0016020|GO:0016757
Lal22g1376 384 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 70 380 IPR044174 GO:0016757
Lal22g1376 384 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 70 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1376 Lal-Chr22 16668811 16671218 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1376 22 16668811 16671218 Lal8g0437 8 2936695 2941188 ECH
Lal22g1376 22 16668811 16671218 Lal22g1376 22 16668811 16671218 ECH
Lal22g1376 22 16668811 16671218 Lal18g0623 18 5418338 5420146 ECH
Lal18g1021 18 13217360 13226196 Lal22g1376 22 16668811 16671218 ECH