Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1353 ATGGTCTTTCCTTCCATTTCAATCTATCTAGATCCACCCAACTTCTCACAACAACAACCTAATCAGCAAGGAGGAATTGGAACACAAAATTTTCAAACCCTACCTCCACTACATCCACCTCCTCCAACGACTGCACCAGTCGTTGAAGGTGGTAACTATCAGGGCTCTATCAGACCAGGATCAATGGTCGATAGAGCTCGATCGGCAAAGATACATCAACCAGATATCACATCAAAGTGTCCAAGATGTGATTCCACAAACACCAAGTTCTGCTACTACAACAACTACAGCCTTTCGCAGCCTCGCCATTTCTGCAAGACTTGCCGTCGTTACTGGACAAGAGGTGGTGCACTAAGAAACGTGCCAGTTGGTGGTGGCTTCAGAAGAAACAAAAGAAGCAAAGGAAGCAACAATAGATCAAAATCACCAATGAAAAGTGCAGTTTCTATATCTGCAAGTACAAATTCTAATAATTCTTCTAGTGTCTGCACTAATAGTACTCATATGATGAATAATTTTTCAACTCATTTCCCATTATTGCCAACTTTGCATCATAACTCCTATATTGACTACATTTCTGAGAGCACTGGCTTGCATTTTGGAACATTATCAACACCATTAGATGCCAGAAATGGAAATAATACTACTGGTGCTGGTGGTGGAAGTGATGCTGAGTTTCAAATTGGTACTAGTTCATCAAGTGGTAATGGTAATAATAATGGTGGTTCTTTAGTTTCAAATGGCATTCATTTTGAGCAATGGATGTTACCTAATTTTCAACAAGTTCATCAGCAACAGTTTCCTAATTTCTTGACTAACTTGGAAACACAGATTGGGTTGTTTAAGTTTGATGGAGAAAAAACTGAACCACCAAGTTATGCTAGAGATGGAGGAATGAAGTTTTTGTCTAAGTCCTTGGATTCTAGTGTTAGTGGGATAAATCCTCAGATTAACACAACTAATATGGAAGAAAATCAAGGGTTGAGAAAAAATATTTTGGGTACTAATTCAGGAAATAATATACTATGGAGTGGAAGTGGCACTGCATGGACTGAACTTCCTAGTTTCACTCCATCAACCAACTAA 1086 0.3895 MVFPSISIYLDPPNFSQQQPNQQGGIGTQNFQTLPPLHPPPPTTAPVVEGGNYQGSIRPGSMVDRARSAKIHQPDITSKCPRCDSTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSKGSNNRSKSPMKSAVSISASTNSNNSSSVCTNSTHMMNNFSTHFPLLPTLHHNSYIDYISESTGLHFGTLSTPLDARNGNNTTGAGGGSDAEFQIGTSSSSGNGNNNGGSLVSNGIHFEQWMLPNFQQVHQQQFPNFLTNLETQIGLFKFDGEKTEPPSYARDGGMKFLSKSLDSSVSGINPQINTTNMEENQGLRKNILGTNSGNNILWSGSGTAWTELPSFTPSTN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1353 361 MobiDBLite consensus disorder prediction 122 160 - -
Lal22g1353 361 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Lal22g1353 361 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 6 360 - -
Lal22g1353 361 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 360 IPR045174 GO:0003700|GO:0006355
Lal22g1353 361 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Lal22g1353 361 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Lal22g1353 361 MobiDBLite consensus disorder prediction 139 160 - -
Lal22g1353 361 MobiDBLite consensus disorder prediction 211 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1353 Lal-Chr22 16488000 16490111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1353 58 273 C2C2-Dof Transcription Factor Family AT3G55370 47.511 2.56e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal22g1353 zf-Dof 4.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1353 - - gmx:100787357 370.163