Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1051 ATGGAAAGACAAAAGTGGAAAGAACATAAGAATAATGGGTATAAAGATGAATTTTTGTGTGATGTAGATCGAGAACGTAGCCCTATGATTCCTTCTTCCGTTTCTTCATCTCCTTCTAGACCTCTTGGCTATATAGAGCATCATGTTTCCAAATTCGACACTTTGGCTGGCATTGCAATCAAGTATGGTGTTGAGGACCAAGAGAAAGCTGACAGAAACTTTAAGGAAAGGGATGAAAGGCCTTATTCTTTGGAAAAGGTTCTGGATGTGAAAAGGATGAATGGCCTTGTTACGGATCATCAAATGTTTGCACTTAAAACTCTCCAAATTCCACTTCCTGGAAGGCACCCTCCATCTCCTTGTTTATCAAATGGTTCTAGTATTACAGGGCTTGGTAACTCTGGTCACAATTCACCTGATTATGCACACCGAGAACTACTTGAATCATTCCAATCCTTAACAACAAAGTCTTCTGAGCGGAAGGTCTCCCCAGCTATGAGCTCTTTACGGGGTTACTATGGACTTAAAGGGACCTCTAAGTCCTCTGCGCCTATGTCTAGCCGACCTTTGAGTTGCCCCCGGAAATCTAAAAGTTTGGTCAATGTAATTTTGGAAGAGATTATGGAAAAGTCTGATACTGAACCATCTGCTGGAGCCAGGGAAAGCGAGTCGGATAAGTGGAATGGTAAACTCGTCCGTAGGCGTCAAAAATCGGAAGCTGATTTTACCAGGATACCAGAATTACTTATGAGGCCAGATAATAGCAGCAGTGGTGGTCTTCCATCAAGAAAAGGAAAGGGCTTAGCTCTGAGGCAGAATGCCGCTAGCCGAACTGCAGCGGTAACGGATTCTGAATCAAATTGTTTGAGTCTTGTGACAATAGGTTTGGGAGATGCTTCTCTAACTGATGGATCATCTACTGTGAGGAAATCATCAAGTACATCAAGTTTACAAGATCAGGATAACAATGGCTCCTCATTCATTTGGCCAACTTCAAGGTGGAATTTGAAGCCAGATTTACAGGCCTTCACAAATGCAGCCATCGGAAAACCAATCTTTGATGGCTTGCCCAAGCCGATAACCAGCCGAAAAAATAAAGCTGCACTTGATTAA 1113 0.4268 MERQKWKEHKNNGYKDEFLCDVDRERSPMIPSSVSSSPSRPLGYIEHHVSKFDTLAGIAIKYGVEDQEKADRNFKERDERPYSLEKVLDVKRMNGLVTDHQMFALKTLQIPLPGRHPPSPCLSNGSSITGLGNSGHNSPDYAHRELLESFQSLTTKSSERKVSPAMSSLRGYYGLKGTSKSSAPMSSRPLSCPRKSKSLVNVILEEIMEKSDTEPSAGARESESDKWNGKLVRRRQKSEADFTRIPELLMRPDNSSSGGLPSRKGKGLALRQNAASRTAAVTDSESNCLSLVTIGLGDASLTDGSSTVRKSSSTSSLQDQDNNGSSFIWPTSRWNLKPDLQAFTNAAIGKPIFDGLPKPITSRKNKAALD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1051 370 PANTHER LOC443603 PROTEIN-RELATED 87 370 IPR045030 -
Lal22g1051 370 PANTHER LOC443603 PROTEIN-RELATED 32 65 IPR045030 -
Lal22g1051 370 MobiDBLite consensus disorder prediction 209 246 - -
Lal22g1051 370 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 32 65 - -
Lal22g1051 370 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 87 370 - -
Lal22g1051 370 Gene3D LysM domain 32 117 IPR036779 -
Lal22g1051 370 MobiDBLite consensus disorder prediction 158 194 - -
Lal22g1051 370 MobiDBLite consensus disorder prediction 209 271 - -
Lal22g1051 370 MobiDBLite consensus disorder prediction 301 324 - -
Lal22g1051 370 MobiDBLite consensus disorder prediction 179 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1051 Lal-Chr22 9286185 9289390 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1051 22 9286185 9289390 Lal22g1051 22 9286185 9289390 ECH
Lal22g1051 22 9286185 9289390 Lal6g1153 6 8854877 8859067 LSH