Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1024 ATGGGTGCACTTATCTATGTTTTCATGTTAACAATCCTTTGTTGTTCTTTTCTAATTCAAAATGCTGTGTCTGCTTCTGATTATGGATCAGCTCTCACAAAAAGTTTATTATTTTTTGAGGGTCAAAGATCAGGGAAGTTACCTCCTAACCAGAGAGTGAAATGGAGAGGAGATTCTGGCCTTACTGATGGTAAAAGTGCAAGAGTGGATCTTGTGGGTGGATACTATGATGCCGGAGACAACCTAAAACTTGGTTTTCCATTTGCATTTACAATAACAATGCTTTCTTGGAGCACAATAGAATTTGAAGACAAACTTTCAGCGAAAAATGAACTTGACAATGCATTAAGCGCTATTAGATGGGGAACAGATTATTTTATCAAAGCACACACAGAACCAAATGTATTATATGGAGAAGTTGGTGAACCAGATTCAGACCATCAATGTTGGCAGAGACCAGAGGATATGACTACACCACGTGATGCATATAAGATTGATGAACAACACCCAGGTTCTGATCTTGCTGCTGAAACTGCTGCTGCTTTGGCCGCTGCTTCCATAGCATTTAAAACTGCGGATCCTAAATATTCAAGCAAATTGAAAATGCATGCAGTTCAGTTGTTTGATTTTGCAAAGAATCGTCAAGGCTTATATTCAGATAGTATCCCTGCCGCGCGTAAAGTATATTCCAGTAGTGGGTATAAGGACGAATTACTATGGGGAGCAGCATGGCTTTATCGTGCCACTGGATCGAAAACTTACCTTGATTATTTGGGACAAGCCGGTGATAATGGTGGTGTACGATCTACATTTAGTTGGGATGACAAATTCTCAGGTGCACAAGTTCTCGTAGCCAAGCTTGTTTTGGATGGTACAGTGGGTTCATCAGGGATCTGGGCTCAGTTCAAGTCACAAGGAGAAGATTATATATGCTCTTGTGCTCAGAAAGGAAGTAGAAATGTGGCTAAAACACCAGGGGGTCTCTTATGGTTTCTCCCAGAGAATAATTCACAATATGTTACTAGTGCTACATTTTTAATGTCCGTCTATGCTAAATATTTATCTAAAAAAGGTTCATCTCTCCAATGTAAGGGTGGCTCTATTAGTCCTTCAGATCTCAAATCTTTAGTAAAAGCTCAGGTGGATTATCTATTGGGTTCTAATCCAAAAGGCATGAGTTACATGGTGGGGTACGGCAAAAAATTTCCACAACAAATTCATCATAGAGCAGCATCCATTGTATCAATTAAAAAGGATCCTACACCAGTAAGTTGTAAAGGTGGGTTTGACCAATGGTTCAACAAAAATGCACCAAATCCTAATGTACTAGAAGGAGGAGTTGTGAGCGTAGATGGAAGTGATAATTATAACGATGGTAGAAATAATTACCAAACAGCTGAGCCATCAACTGTTGTTAATGGACCTTTGGTCGGTGTTCTTGCTTACTTAGCTTAA 1455 0.3945 MGALIYVFMLTILCCSFLIQNAVSASDYGSALTKSLLFFEGQRSGKLPPNQRVKWRGDSGLTDGKSARVDLVGGYYDAGDNLKLGFPFAFTITMLSWSTIEFEDKLSAKNELDNALSAIRWGTDYFIKAHTEPNVLYGEVGEPDSDHQCWQRPEDMTTPRDAYKIDEQHPGSDLAAETAAALAAASIAFKTADPKYSSKLKMHAVQLFDFAKNRQGLYSDSIPAARKVYSSSGYKDELLWGAAWLYRATGSKTYLDYLGQAGDNGGVRSTFSWDDKFSGAQVLVAKLVLDGTVGSSGIWAQFKSQGEDYICSCAQKGSRNVAKTPGGLLWFLPENNSQYVTSATFLMSVYAKYLSKKGSSLQCKGGSISPSDLKSLVKAQVDYLLGSNPKGMSYMVGYGKKFPQQIHHRAASIVSIKKDPTPVSCKGGFDQWFNKNAPNPNVLEGGVVSVDGSDNYNDGRNNYQTAEPSTVVNGPLVGVLAYLA 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1024 484 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 383 409 IPR018221 -
Lal22g1024 484 SUPERFAMILY Six-hairpin glycosidases 23 483 IPR008928 GO:0005975
Lal22g1024 484 PANTHER ENDO-1,4-BETA-GLUCANASE 14 483 - -
Lal22g1024 484 PANTHER ENDOGLUCANASE 19-RELATED 14 483 - -
Lal22g1024 484 Pfam Glycosyl hydrolase family 9 28 480 IPR001701 GO:0004553|GO:0005975
Lal22g1024 484 Gene3D - 25 484 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1024 Lal-Chr22 8929536 8932736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1024 5 483 Glycoside Hydrolase AT2G44550 60.208 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1024 22 8929536 8932736 Lal22g1024 22 8929536 8932736 ECH