Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0933 ATGGATAAGTTAGGTCTTCTCAAACTTCGTGTTAAAAGAGGCATTAATCTTGCCATTAGGGACGCTCGTACCAGTGACCCTTATGTCGTTGTCCATTTCGGTGATCAGAAGCTGAAGACCCGTGTCATTAAAAACAACTGCAATCCTGAGTGGAATGAAGAATTGACCCTTTTTGTTAGGGATGTTAAAACTCCTATACATCTAACAGTTTATGACAAAGACACTTTCTCAGTGGATGACAAAATGGGTGATGCAGAAATAGACATAAGGCCATACATGCATAGTGTGAATATGGGGTTGAACAAGCTCCCAAATGGTTGTGCAGTGAAGAGGGTTCTACCAAGTAGGAGTAACTGTCTTGCTGAAGAAAGCAGTTGCATTTGGCATAATGGAAATATCACCCAAGAAATGATTCTAAGATTGAGAAATGTTGAGTGTGGAGAAGTAGTTGTTGAACTTGAGTGGGTTGATAATCCAAGTTGA 483 0.4017 MDKLGLLKLRVKRGINLAIRDARTSDPYVVVHFGDQKLKTRVIKNNCNPEWNEELTLFVRDVKTPIHLTVYDKDTFSVDDKMGDAEIDIRPYMHSVNMGLNKLPNGCAVKRVLPSRSNCLAEESSCIWHNGNITQEMILRLRNVECGEVVVELEWVDNPS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0933 160 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 147 IPR035892 -
Lal22g0933 160 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 2 159 - -
Lal22g0933 160 Gene3D C2 domain 2 160 IPR035892 -
Lal22g0933 160 CDD C2_ArfGAP 4 147 - -
Lal22g0933 160 ProSiteProfiles C2 domain profile. 1 102 IPR000008 -
Lal22g0933 160 SMART C2_3c 6 101 IPR000008 -
Lal22g0933 160 Pfam C2 domain 6 91 IPR000008 -
Lal22g0933 160 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 159 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0933 Lal-Chr22 7410663 7413422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0933 37 160 C2H2 Transcription Factor Family AT1G70790 67.460 3.15e-60 181
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0933 22 7410663 7413422 Lal22g0933 22 7410663 7413422 ECH
Lal22g0933 22 7410663 7413422 Lal8g0479 8 3237048 3239338 ECH