Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0927 ATGAAGGATCTTCCCCAAGGTTACCGTCCTAACGTAGGTGTTTGTCTCATCAACTCTCAAGATCAGGTTTTTGTGGCTTCTAGATTGAATGTTCCAGGAGCATGGCAAATGCCTCAGGGGGGAATTGAAGATGGTGAAGAGCCCAAATCTGCTGCTATTAGGGAACTTCGAGAAGAAACTGGAATAACATCTGCTGAAATAGTTGCTGAGGTTGATAATTGGTTGAGATATGACTTCCCTCCTGCTGTGAAGGCTAAAGTCAGTCGTCTCTGGGGTGGTGAATGGCATGGACAGGCACAAAAGTTCCTCATGAGATTAACAAAGGATGAGAGTGAAATTAATTTGGCTAATGGTGAAGCCGACCCAGAATTTGCAGAGTGGAAATGGGCGAACCCGGATGAAGTTATTGAGCAGGCAGTAGACTACAAGAGACCAACCTATGAAGAAGTTGTAAGAACCTTCAAGCCTTACTTTCAAGGGAATGCTATATCAGCCAAATGTAAATCAGCAAAGTGGTGA 519 0.4412 MKDLPQGYRPNVGVCLINSQDQVFVASRLNVPGAWQMPQGGIEDGEEPKSAAIRELREETGITSAEIVAEVDNWLRYDFPPAVKAKVSRLWGGEWHGQAQKFLMRLTKDESEINLANGEADPEFAEWKWANPDEVIEQAVDYKRPTYEEVVRTFKPYFQGNAISAKCKSAKW 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0927 172 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 1 158 - -
Lal22g0927 172 PANTHER BNACNNG74470D PROTEIN 1 172 - -
Lal22g0927 172 CDD Ap4A_hydrolase_plant_like 7 154 IPR022927 -
Lal22g0927 172 PRINTS NUDIX hydrolase family signature 35 49 IPR020476 -
Lal22g0927 172 PRINTS NUDIX hydrolase family signature 49 64 IPR020476 -
Lal22g0927 172 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 1 172 - -
Lal22g0927 172 Pfam NUDIX domain 8 149 IPR000086 -
Lal22g0927 172 SUPERFAMILY Nudix 7 156 IPR015797 -
Lal22g0927 172 ProSiteProfiles Nudix hydrolase domain profile. 7 152 IPR000086 -
Lal22g0927 172 ProSitePatterns Nudix box signature. 40 61 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0927 Lal-Chr22 7354119 7359200 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0927 22 7354119 7359200 Lal22g0927 22 7354119 7359200 ECH