Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0909 ATGTTGCATTTAGTTTTATTCCTTTTTCTTCTATGCAACTTCTTTGTTGCACCTGTGACCCCTCTCAACATTGAAGGTTCTGTACTTTTAACACTGAAAAATTCCATAACCAATGACCCAGAAGGGTCTATGAGTAATTGGAACTCTTCTGATGAAAATCCATGTTCATGGAATGGGGTCACATGCAAGGACCAGAGTGTTATCTCCATTAGTATTCCAATGAAGAAACTTTATGGGTTTCTACCTTCTACTCTAGGATCTCTATCTCAGCTTCGCCATGTAAATTTCAGAAACAATAATCTCTTTGGGAATTTGCCTAGTGAGCTTTTTGAAGTTCAGGGGCTGCAAAGTTTGGTGCTTTATGGAAATTCCTTATCTGGGTTTGTTCCAAATGAGATTGGGAAGCTCAGGTACCTTCAAACTCTAGATTTATCACAAAATTTCTTTAATGGGTCTTTGCCTGCTACAATTGTTCAATGCAAGAGGCTTAAAGCACTTGTTTTGAGTCATAATAATTTTAGTGGTACTTTGCCAGATGATGGATTTGGTAGTAATTTACTTTCCTTGGAAAAACTTGATCTTTCCTTCAATCAGTTCAATGGTTCAATTCCTAGTGATATTGGAAAGTTGTCAAGTTTGCAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTCAATCCCACCAAGCCTTGGAAATTTGCCTGAGAAGGTTTACATTGATTTGTCTTACAATAATTTGAGTGGTTCTGTACCCTTAATTGGTGCCTTAATGAATAGAGGACCAACTGCTTTTATTGGTAATTCTGGTCTCTGTGGCCCCCCTTTGAAGAATCCATGTGCATTGGATTCTCCTGGTTCTGCAAGTTCACCTTCCTCGTTTCCATTTTTGCCCGGTAATTACCCATCTCAAGGTAACGGTTTGGGGAAGAATGAGAAAAACAAAGGGCTAAGTAAGGGTGCTGTGGTTGGCATTATTGTTGGTGATGTAATTGGGATTTGCATTTTGGGTTTGCTATTCTCTTACTTTTATTCAAGGGTTTGTGGTTTTAATCAGGAACGGGACGAGGGTGGTATCGAGAAGGAAACGGGAGTGAGGGAAAAGTGGTTATGTTTCAGAAAGGGTGAATCTGAGACCCTATCTGATCATGTTGAGCAATATGATCTTGTCCCATTGGATACTCAAGTGGCTTTTGATTTGGATGAGCTTCTTAAGGCTTCGGCTTTTGTTCTCGGAAAGAGTGGAATCGGGATTGTCTATAGAGTGGTGCTTGAAGATGGGCTTACTTTAGCTGTCAGAAGATTGGGTGAGGGAGGTTCTCAAAGGTTTAAAGAATTCCAAACTGAAATTGAAGCAATAGGAAAGCTAAGGCATCCTAATATTGTTACTTTGAGAGCTTATTATTGGTCAGTTGACGAGAAACTTCTCATCTATGATTATATTCCCAACGGAAGCCTCGATACGGCAATTCATGGGAAAGCTGGACTTGTCACATTTACGCCATTATCTTGGTCGGATCGGATGAAAATCATGAAAGGAATTGCAAAAGGATTGGTATACCTGCATGAGTTTAGCCCCAAAAAATATGTCCATGGAGACCTGAAGCCGAGTAAGATACTACTAGGCCATAACATGGAACCCCACATTTCTGATTTTGGTCTTGGACGCCTTGCAAATATCGCCGGAGGAGGTTCTCCAACCTTGCAATCGAACCGAGTGGCTGCAGAGAAACCACAAGAAAAACAAAATAGCTCATCCGCAGAAGTCACAGCTAATATTTTGGGCAATGGTTATCAGGCTCCAGAGACAATGAAAGTGGTTAAGCCATCACAAAAATGGGATGTGTATTCATACGGTGTGATCTTGCTAGAAATGACCACGGGACGATTGCCGATTATCCAACTTGGTAACTCGGAAATGGACCTCGTTCAATGGATTCAGTTCTGCATTGACGATAAGAAGCCGCTCTCGGATGTCTTAGACCCGTATTTAGCCGACGACGTGGATAAGGAAGAAGAGATTATTGCAGTTCTAAAGATTGCAATTGCTTGTGTCAATAGCAACCCGGAAAAGAGACCGATAATGAGGCATGTGTTTGATGTTTTGGATAGAGTGTCCATGTCCACTGACTAA 2136 0.4082 MLHLVLFLFLLCNFFVAPVTPLNIEGSVLLTLKNSITNDPEGSMSNWNSSDENPCSWNGVTCKDQSVISISIPMKKLYGFLPSTLGSLSQLRHVNFRNNNLFGNLPSELFEVQGLQSLVLYGNSLSGFVPNEIGKLRYLQTLDLSQNFFNGSLPATIVQCKRLKALVLSHNNFSGTLPDDGFGSNLLSLEKLDLSFNQFNGSIPSDIGKLSSLQGTVDLSHNHFSGSIPPSLGNLPEKVYIDLSYNNLSGSVPLIGALMNRGPTAFIGNSGLCGPPLKNPCALDSPGSASSPSSFPFLPGNYPSQGNGLGKNEKNKGLSKGAVVGIIVGDVIGICILGLLFSYFYSRVCGFNQERDEGGIEKETGVREKWLCFRKGESETLSDHVEQYDLVPLDTQVAFDLDELLKASAFVLGKSGIGIVYRVVLEDGLTLAVRRLGEGGSQRFKEFQTEIEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYIPNGSLDTAIHGKAGLVTFTPLSWSDRMKIMKGIAKGLVYLHEFSPKKYVHGDLKPSKILLGHNMEPHISDFGLGRLANIAGGGSPTLQSNRVAAEKPQEKQNSSSAEVTANILGNGYQAPETMKVVKPSQKWDVYSYGVILLEMTTGRLPIIQLGNSEMDLVQWIQFCIDDKKPLSDVLDPYLADDVDKEEEIIAVLKIAIACVNSNPEKRPIMRHVFDVLDRVSMSTD 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0909 711 ProSiteProfiles Protein kinase domain profile. 406 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0909 711 Pfam Leucine rich repeat 90 147 IPR001611 GO:0005515
Lal22g0909 711 SUPERFAMILY L domain-like 27 278 - -
Lal22g0909 711 MobiDBLite consensus disorder prediction 569 588 - -
Lal22g0909 711 CDD STKc_IRAK 412 705 - -
Lal22g0909 711 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 710 - -
Lal22g0909 711 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Lal22g0909 711 Gene3D Transferase(Phosphotransferase) domain 1 482 711 - -
Lal22g0909 711 Pfam Protein kinase domain 412 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0909 711 SUPERFAMILY Protein kinase-like (PK-like) 411 703 IPR011009 -
Lal22g0909 711 Gene3D Phosphorylase Kinase; domain 1 377 481 - -
Lal22g0909 711 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 710 - -
Lal22g0909 711 Gene3D Ribonuclease Inhibitor 182 283 IPR032675 -
Lal22g0909 711 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0909 Lal-Chr22 7180976 7183557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0909 4 711 Receptor kinase-like Gene Family AT2G01210 66.759 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal22g0909 Pkinase 5.4e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0909 22 7180976 7183557 Lal22g0909 22 7180976 7183557 ECH