Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0708 ATGGAAGAAAATAAAGACAACGCACCGCGACCACCTTTCGAGCCTGAAACAACCACTGAGTTCGCCGGCGTTTCGAGCTTGCCGCACGGCGTCGATGACTCCGACAGTCCTGTTGATACGGCTGCTGTGGCGGCTTCATCGTCGAGGTCGAATAACCAATCGGTGTCTACGAGCTCCAGTGAGGATCCGCCGGAGAAATCCACCGTCTTCGACGGGAAACTGCGGCCTGAGATTCCGAGTAAAATTAAAAAGAAGGGGCAAAAACGTATAAGGCAGCAACGGTTTGCATTTATGACCAAGAGTGATGTTGATCATCTTGAAGATGGCTACAGATGGAGAAAGTATGGTCAGAAAGCAGTTAAAAATAGTCCATTTCCTAGGAGCTACTATCGTTGCACAAACAGCAAATGCATGGTGAAGAAAAGGGTTGAACGTTCATCAGAGGACCCAACTATTGTTATTACTACATATGAAGGCCAACACTGTCATCACACAGTTGCAGGTTTTCCACGAGGAGGAATAATCACTAGTCATGAATCAGCTTTTCACAGTGTCCATTTGGCTCCTACAATGTCACATATATATTATCCTATTCATTTGCCAATAGAGGATGGAGAAGCTGGAGGATCCAACACTGTCATGCCAGCTGATGAACTGACACATTCTCCCATGGATGAAGGACTGCTAGGAGATGAGGGAAATATTTGA 708 0.4619 MEENKDNAPRPPFEPETTTEFAGVSSLPHGVDDSDSPVDTAAVAASSSRSNNQSVSTSSSEDPPEKSTVFDGKLRPEIPSKIKKKGQKRIRQQRFAFMTKSDVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCMVKKRVERSSEDPTIVITTYEGQHCHHTVAGFPRGGIITSHESAFHSVHLAPTMSHIYYPIHLPIEDGEAGGSNTVMPADELTHSPMDEGLLGDEGNI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0708 235 PANTHER BNACNNG26190D PROTEIN 25 198 - -
Lal22g0708 235 MobiDBLite consensus disorder prediction 1 89 - -
Lal22g0708 235 Gene3D WRKY domain 93 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal22g0708 235 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal22g0708 235 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal22g0708 235 MobiDBLite consensus disorder prediction 66 83 - -
Lal22g0708 235 Pfam WRKY DNA -binding domain 107 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal22g0708 235 SUPERFAMILY WRKY DNA-binding domain 98 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal22g0708 235 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 198 IPR044810 GO:0003700
Lal22g0708 235 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0708 Lal-Chr22 5108242 5112303 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal22g0708 WRKY 1e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0708 22 5108242 5112303 Lal22g0708 22 5108242 5112303 ECH