Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0673 ATGTCTGAGGTCAACATGAGCAGCTTCTCTCACTACATGGATGATGAATATGAGAAACTCTTCCGAAGAGTGAACCCTCCTAGAGTTGTAATTGATAATGAATCCTGCAAAAATGCCACTGTTATAAGGGTTGATAGTGCAAACAAGTATGGAATACTTCTTGAAGTTGTACAAATTCTCACTGATCTAAATCTCATCATAACTAAGGCTTATATATCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTTACTGGCCAAGATGGAAACAAAGTTACAGATGAGGCTATTCTGGATTACATTACGAAGTCTCTTGGTCCTGAATCTTGTGTTACTTCTCCTATGAGATCCGTTGGGATGAAACAAACAATGGACTACACTGCAATAGAGCTATTAGGGAGTGATAGGCCAGGGCTTCTTTCAGAAGTGAGTGCTGTTCTAACAAACCTCAAGTGCAACATATTGAATGCAGAGGTGTGGACTCACAATGCGCGCGCCGCGGCTGTGATGCATGTAAATGAAGAGACAGGATCTGCTATCAGTGACCCTCATAAGCTATCTTTAATCAAGGAGCTTCTATGCAATGTGCTTGGTGGTGGGAACAAGAATAGGGTTGCAAAAACTGTTGTCACTGATGAAGTCACACACACTGAGAGAAGGCTTCATCAGATGTTGTTTGCTGATAGGGATTATGACAGAGTTAGTGCTGATGACTTTGATGAGAAGCAAAGACCAAATGTGAATGTTGTGAATTGGTTTGACAAGGATTACTCTGTGGTTACTATCCAATCTAAGGATAGGCCAAAGCTTTTGTTTGACACAGTTTGTACTTTGACAGACATGCAGTATGTGGTTTTTCATGCAAATATCGATGCCGAGGGGCCAGAAGCATATCAGGAATATTACATCAGACATATAGATGGTTCCCCTGTAAAATCAGATGCAGAAAGACAAAGAGTTATTCAATGTCTTGAAGCTGCAATTGAAAGAAGAGTTTCTGAGGGATTGAAGCTAGAACTCTGCACTACCGACAGAGTTGGACTACTATCCGATGTCACACGAATCTTTAGAGAAAATAGTCTCGCTGTTACAAGAGCAGAAGTGACCACTAAAGGCGACAAAGCTATTAATACTTTCTATGTTCGGGGAGCTTCGGGTTGCATTGTCGATTTGAAGACCATAGAATCGATTCGCCAAGCAATAGGCAACACTATACTTCAAGTAAAGGGTTGTCCTAATGAGTCAAAATCTGTTCCCCAAGATTCTCCAACAAGATCCCTCTTTAGTGGTATTTTCAGGTCAAGATCATTTGTTAACTTCGGATTGGTCAAGTCTTATTCTTGA 1347 0.4068 MSEVNMSSFSHYMDDEYEKLFRRVNPPRVVIDNESCKNATVIRVDSANKYGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTGQDGNKVTDEAILDYITKSLGPESCVTSPMRSVGMKQTMDYTAIELLGSDRPGLLSEVSAVLTNLKCNILNAEVWTHNARAAAVMHVNEETGSAISDPHKLSLIKELLCNVLGGGNKNRVAKTVVTDEVTHTERRLHQMLFADRDYDRVSADDFDEKQRPNVNVVNWFDKDYSVVTIQSKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLAVTRAEVTTKGDKAINTFYVRGASGCIVDLKTIESIRQAIGNTILQVKGCPNESKSVPQDSPTRSLFSGIFRSRSFVNFGLVKSYS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0673 448 Gene3D - 337 413 - -
Lal22g0673 448 CDD ACT_ACR_3 258 332 - -
Lal22g0673 448 SUPERFAMILY ACT-like 334 403 IPR045865 -
Lal22g0673 448 SUPERFAMILY ACT-like 36 104 IPR045865 -
Lal22g0673 448 SUPERFAMILY ACT-like 124 180 IPR045865 -
Lal22g0673 448 ProSiteProfiles ACT domain profile. 129 214 IPR002912 -
Lal22g0673 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 446 IPR040217 -
Lal22g0673 448 Pfam ACT domain 40 98 IPR002912 -
Lal22g0673 448 Pfam ACT domain 129 175 IPR002912 -
Lal22g0673 448 CDD ACT_ACR_1 39 109 - -
Lal22g0673 448 ProSiteProfiles ACT domain profile. 41 120 IPR002912 -
Lal22g0673 448 ProSiteProfiles ACT domain profile. 338 414 IPR002912 -
Lal22g0673 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 10 446 - -
Lal22g0673 448 Gene3D - 124 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0673 Lal-Chr22 4765393 4769464 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0673 22 4765393 4769464 Lal22g0673 22 4765393 4769464 ECH
Lal22g0673 22 4765393 4769464 Lal6g0765 6 5126446 5130170 LSH
Lal22g0673 22 4765393 4769464 Lal18g0943 18 12279511 12282661 LSH