Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0646 ATGTCAGCAACTTCGCCGTCTCCGGCATCTTCCACCGCTGAACCATCACCGACCACCCCACCACCCCAACAACCACCCTCTTCCCTTTCACCTAACACTTCAATTTCAACCCCACCACCATCTCAGTCCCCTCCTCCGGCAACACCATCAGCTCCTCCTCCAGATGTGACGACACCGGTCCCATTATCTTCACCTCCGCCACCACTACCATCCCAGGCTTCACCTCCCCCACCTTCAGTAGTAGCTCCTCCTCCATTATCACCGCCATCGCCACCGCCTCCATCACCAATTCCACCAAGAAATTCTCCACCCCCATCAAACCCATCAACGCCCCCAGAGAATCTACCCCCTCCTCCAGCTGATGCACCACCACCCCGGGGTTCTCCACCACCTGTGCCACCCCCTATAAACTCACCTCCACCAAAAGCATCATTGCCGCCGCCTGCGAATTCACCTCCACCGCCAGCATCAGTGCCACCACCTGCGAATTCACCTCCACCGCCAGCATCAGTGCCACCACCTGCGAATTCACCTCCACCGCCAGCATCAGTGCCACCACCTGCGAATTCACCTCCACCGCCAGCATCAGTGCCACCACCTGCGAATTCACCTCCACCACCAGCATCAGTGCCGCCACCTGCGAATTCATCTCCACCGCCCGCATCAGTTCCACCGTCTGTGAATTCACCTCCACCGCCAGCATCAGTGCCGTCACCAAAACCATCGACACCGCCACCAACAACCACCCCTCCTCGAAATTCGCCTCCCCCTCCAGGAAGTGCACCTCCTTCTTCTAGGATTAGTCCTAATCCTCAACCTGCTCCCCCTTCAAATTCTACACCAAAACCATCCCCTCAACCTCCCACAATCATGTTGTCGCCGCCTCCGACCTTGCTTGTTCCACCAGCACCATCACAAAATGGAACAGAGAACTCAATCCCGGCAACTGGAAGTAGTGGTGGAAAAGGAATTGGTACTGCAGGTATAGTTGCTATTACTGTAGTGGCTGTTTTTTTTTTGCTTGGCTTCATTGGAGTTGCTATTTGGTGCATCAGGAGGCAAAAGAGAAAGGGGCATGAGAATGGTGGTTATGTCATGCCATCCACTCTTCCCTCATCACCTGAATCAGATTCATCCCTTTTTAAGGCACATTCTTCAGCTCCTCTTGTACAAAGTGGCTCTGGTAGTGATGTGTATACACCACCATCTGAACCTGGTGGACTAGGAAACTCTAGGTCATGGTTTTCATACGAAGAGCTAATCAAGGCAACAAATGGTTTCGCAAATCAAAATCTTTTGGGAGAGGGAGGATTTGGTTCTGTATATAAAGGATACCTACCTGATGGGAGAGAGATTGCAGTCAAGCAGTTGAAAATTGGTGGAGGCCAGGGGGAGAGGGAATTCGAAGCTGAAGTTAAAATTATTAGCCGCATACATCATCGTCATTTGGTTTCTTTAGTGGGGTATTGCATTCAAGATAACAAAAGATTGCTTGTCTATGACTATGTCCCCAACAATAACCTTTATTTTCACCTGCATGAGGAAGGTAGGTCTGTGCTAGGCTGGGCAAACCGTGTTAAAATAGCAGCTGGTGCAGCTCGAGGAATAGCTTATCTCCATGAAGACTGTAATCCTCGGGTTATTCACAGGGATATCAAGTCATCAAACATTCTTTTAGATTACAACTTTGAAGCTCAAGTCTCAGATTTTGGGCTAGCTAAATTAGCTCTTGATGCAAATACACATATAACCACACGTGTCATGGGAACTTTTGGGTATGTTGCTCCTGAATATGCATCAAGCGGAAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTCGTGCTTTTGGAGCTCATTACCGGAAGGAAATCAGTAGATGCATCTCAACCAATCGGAGATGAAAGTCTAGTTGAATGGGCTCGACCTTTACTGAGTCATGCTCTTGATAATGAGGAGTATGATAGTTTATCAGATCCAAGGCTAGAAAAGAACTATGTTGAAAGTGAAATGTTTTGCATGATTGAAGTTGCAGCTGCTTGTGTGCGGCATTCAGCTGCAAAGAGACCTCGAATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGCAGCTTCAGATCTAACAAATGGAATGCGACTCGGGGAAAGCGAGGCGTTTAATTCTGCGCAGCAATCTGCCGAAATAAGATTATTTCGGAGGATGGCATTTGGTAGTCAAAATTATAGCTCAGACTTATTTAGCCAGGATAGTTTGAATACGTGA 2265 0.4848 MSATSPSPASSTAEPSPTTPPPQQPPSSLSPNTSISTPPPSQSPPPATPSAPPPDVTTPVPLSSPPPPLPSQASPPPPSVVAPPPLSPPSPPPPSPIPPRNSPPPSNPSTPPENLPPPPADAPPPRGSPPPVPPPINSPPPKASLPPPANSPPPPASVPPPANSPPPPASVPPPANSPPPPASVPPPANSPPPPASVPPPANSPPPPASVPPPANSSPPPASVPPSVNSPPPPASVPSPKPSTPPPTTTPPRNSPPPPGSAPPSSRISPNPQPAPPSNSTPKPSPQPPTIMLSPPPTLLVPPAPSQNGTENSIPATGSSGGKGIGTAGIVAITVVAVFFLLGFIGVAIWCIRRQKRKGHENGGYVMPSTLPSSPESDSSLFKAHSSAPLVQSGSGSDVYTPPSEPGGLGNSRSWFSYEELIKATNGFANQNLLGEGGFGSVYKGYLPDGREIAVKQLKIGGGQGEREFEAEVKIISRIHHRHLVSLVGYCIQDNKRLLVYDYVPNNNLYFHLHEEGRSVLGWANRVKIAAGAARGIAYLHEDCNPRVIHRDIKSSNILLDYNFEAQVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKSVDASQPIGDESLVEWARPLLSHALDNEEYDSLSDPRLEKNYVESEMFCMIEVAAACVRHSAAKRPRMGQVVRAFDSLAASDLTNGMRLGESEAFNSAQQSAEIRLFRRMAFGSQNYSSDLFSQDSLNT 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0646 754 Pfam Protein tyrosine and serine/threonine kinase 430 698 IPR001245 GO:0004672|GO:0006468
Lal22g0646 754 ProSitePatterns Protein kinases ATP-binding region signature. 433 455 IPR017441 GO:0005524
Lal22g0646 754 CDD STKc_IRAK 433 703 - -
Lal22g0646 754 MobiDBLite consensus disorder prediction 359 406 - -
Lal22g0646 754 Gene3D Phosphorylase Kinase; domain 1 407 502 - -
Lal22g0646 754 PANTHER BNACNNG34790D PROTEIN 146 751 - -
Lal22g0646 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Lal22g0646 754 Gene3D Transferase(Phosphotransferase) domain 1 503 719 - -
Lal22g0646 754 MobiDBLite consensus disorder prediction 37 302 - -
Lal22g0646 754 MobiDBLite consensus disorder prediction 13 28 - -
Lal22g0646 754 SUPERFAMILY Protein kinase-like (PK-like) 409 698 IPR011009 -
Lal22g0646 754 SMART serkin_6 427 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0646 754 MobiDBLite consensus disorder prediction 303 319 - -
Lal22g0646 754 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 146 751 - -
Lal22g0646 754 MobiDBLite consensus disorder prediction 366 399 - -
Lal22g0646 754 ProSiteProfiles Protein kinase domain profile. 427 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0646 754 MobiDBLite consensus disorder prediction 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0646 Lal-Chr22 4589290 4595405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0646 208 749 Trihelix Transcription Factor Family AT5G38560 57.482 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lal22g0646 PK_Tyr_Ser-Thr 7.7e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0646 22 4589290 4595405 Lal22g0646 22 4589290 4595405 ECH