Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0644 ATGAGGGGTGGTGGCAAGATAAGGAAGCAATTGCATCTGAGCAAGATCTACTCATTTGCGTGTGGCAAACAATCTTTCAAGGGAGATCATTCGCAGATTGGAGGGCGCGGCTATTCGAGGGTTGTGTTCTGCAATGAGCCGGATAACTTTGAAGTTGAGATAAGGAACTATGCAGATAATGCTGTGAGGTCTACAAAGTATACCATTGCTACTTTCTTACCTAAGTCACTGTTTGAGCAATTTAGGAGAGTGGCTAATTTCTATTTTCTGGTGACTGGTATCTTGTCCTTCACCCAACTTGCTCCTTATACAGCTGTTAGTGCTATTCTTCCTTTGATTGTTGTTATTGGAGCAACTATGGTCAAAGAAGGTATTGAAGATTTGCGTAGGAAAAAGCAGGATATTGAAGTGAACAATAGAAGAGTTAAAGTGCATAAAGGTGATGGAACTTTCGAATATACTGAGTGGAAGAATCTGAGGGTTGGGCATATAGTAAAGATTGAGAAGGATGAATTCTTCCCTTCAGATCTCCTACTACTTTCATCAAGTTACGAAGATGCAGTCTGCTATGTGGAGACTATGAACTTGGATGGGGAAACAAATTTGAAGGTAAAACAAGGGTTGGAAGTAACTTCTTCCTTACACGAGGACTTCAAGTTCCGTGATTTTAAAGCTACAATCAAATGTGAAGATCCAAATGCAAATCTGTATTCATTTGTTGGGAGCATGGAGTTTGAAGAACAACAATATCCACTTTCTCCTCAGCAGCTTCTTCTAAGAGACTCTAAACTTCGTAATACAGATTACATATTTGGAGTTGTTGTGTTCACTGGTCACGATACGAAGGTTATTCAAAATTCTACTGACCCCCCTTCAAAGAGAAGCAAAGTTGAGAGGAAGATGGATAGAGTTATCTACTTCTTGTTTTGTATTTTATTTATAATGGCATTTGCTGGATCTATTTCCTTTGGCATTATAACCAAAGACGACTTGGATAATGGGGTGATGAAAAGATGGTATCTCAGACCAGATAATTCTACAATTTTCTTTGATCCTAAAAGAGCATCAGCTGCTGCTATATATCATTGTTTGACAGCTTTGATGTTATACGGCTTCTTCATTCCCATCTCCTTGTATGTATCAATAGAAATCGTCAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCACATGTACTATGAAGAAGCAGACAAACCAGCCCATGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACATGCAACTCAATGGAATTCATCAAATGTTCCATTGCCGGGGTAGCTTATGGCCGTGGTGTTACAGAGGTCGAGAGGGCCATGAATAGAAGAAATTCACCTGTGATCAATGAGAATGTTAATGTCTCAGAATCAGGTGATATAAAGGAATCTCCTGGTAAAAGAGCACCTGTCAAAGGTTTTAACTTTACAGATGAAAGGATAATGAGTGGAAACTGGGTTAGTGAGCCTTATAGAGATGTTATCCAGAGTTTTTTCCGCTTGTTGGCAATCTGTCATACAGCCATACCAGAAGTGCATGAAGACACAGAAAATGTCTCATATGAAGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCAGCAAGAGAAGTTGGTTTTGAATTCTATAAAAGGACTCAGACTACTTTGTCAATGTACGAGTTGGATCCAGTGTCTGGCGAGAAAGTTGAAAGGATATACAAGCTTCTCAATGTTTTAGAATTCAATAGCACAAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGGAGAATTTTGCTACTCTGTAAAGGTGCTGACAGTGTGATGTTTGAAAGGCTTGCCAAGAACGGGAGGGAGTTTGAAGAGAAAACCTTGGAACACGTACATGAATATGCTGACGCGGGTCTAAGAACCCTGATATTGGCATATCGTGAACTTAATGAAGAAGAATACAAGGAGTTTGATAATAAGATATCTGAAGCAAAAAATTCAGTCAGGGCCGATCAGGAAACTCTGGTTGAGGAAGTATCAGATAAGATTGAGAGGGATCTGATCCTTCTTGGTGCAACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGGTTGCATTGACAAACTTGCCCAAGCTGGTATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACCGCCATCAATGTTGGTTATGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATTTGGAGACTCCAGAAATTCACGCAGTGGAGAAGGTTGGAGACAAGAGGGCTATTACCAAGGCTTCAAGGGAATGTGTACAGAATCAGATATCTGAAGGCATGCAACAGGTTATCACATCCAGAGGTTCTTCTCAGCAAGCATTTGCTCTGATTGTTGATGGAAAATCACTTGCTTATGCTCTGGACGATAATATGAAGAACATGTTTCTAGACCTTGCTGTCTGCTGTGCATCTGTTATCTGCTGTCGTTCATCACCAAAGCAGAAGGCACTTGTTACTAGACTGGTCAAATCTGGAACTGGTAAAACTACATTAGCTATTGGTGACGGAGCTAATGACGTGGGAATGCTTCAAGAAGCAGATATAGGGGTTGGAATCAGTGGTGTTGAAGGAATGCAGGCCGTTATGTCTAGCGATATTGCAATTGCACAATTCCGTTATTTGGAACGGTTACTTCTTGTGCACGGTCATTGGTGTTACCGGAGGATCTCATCAATGATATGCTATTTTTTCTACAAGAATGTCACATTTGGCTTTACCGTGTTCTTATATGAGGTGTATGCATCATTCTCCGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAACGTCTTCTTTTCATCACTTCCCGTGATTGCCCTTGGGGTCTTTGACCAGGATGTATCTGCCCGGTACTGTCTGAAGTTTCCTATGTTATATCAAGAAGGTGTCCAAAATATTCTCTTCAGCTGGCGACGAATACTCAGCTGGATGCTTAATGGGTTTATCAGTGCCATAATAATTTTCTTCTTCTGTACGAAAGCTATGGAGATTCAGGCTTTTAATGACCAGGGAAAAACCACAGGGAGAGATATACTTGGAGCAACAATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAGATGGGACTTGCTATAAGTTACTTCACCTTGATTCAACACATTTTCCTATGGGGCTCCGTTGCTCTATGGTATCTTTTCCTCTTCGTGTACGGATCAATAACTCCGAGTTTTTCCACAAATGCTTACAAAGTTTTCATTGAAGCTCTAGCACCGGCTCCTTCCTATTGGATTGTGACATTTTTTGTGGTTATCTCAACGCTTATACCATATTTCACTTTCTCAGCAATTCAGATGCAGTTCTTTCCCATGCATCACGAAATGGTACAATGGATAAGGTACGAGGGGAAGACAGACGATCCTGAATTATGTGAAATGTTGCAGCAGAGATCACTACGGCTAAACACCGTTGGATCAACCGCACGGATAGCGGCTAATGCTAACCATGTTAGAGACAGAGACTGTGGACTATAG 3600 0.4089 MRGGGKIRKQLHLSKIYSFACGKQSFKGDHSQIGGRGYSRVVFCNEPDNFEVEIRNYADNAVRSTKYTIATFLPKSLFEQFRRVANFYFLVTGILSFTQLAPYTAVSAILPLIVVIGATMVKEGIEDLRRKKQDIEVNNRRVKVHKGDGTFEYTEWKNLRVGHIVKIEKDEFFPSDLLLLSSSYEDAVCYVETMNLDGETNLKVKQGLEVTSSLHEDFKFRDFKATIKCEDPNANLYSFVGSMEFEEQQYPLSPQQLLLRDSKLRNTDYIFGVVVFTGHDTKVIQNSTDPPSKRSKVERKMDRVIYFLFCILFIMAFAGSISFGIITKDDLDNGVMKRWYLRPDNSTIFFDPKRASAAAIYHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERAMNRRNSPVINENVNVSESGDIKESPGKRAPVKGFNFTDERIMSGNWVSEPYRDVIQSFFRLLAICHTAIPEVHEDTENVSYEAESPDEAAFVIAAREVGFEFYKRTQTTLSMYELDPVSGEKVERIYKLLNVLEFNSTRKRMSVIVKDEEGRILLLCKGADSVMFERLAKNGREFEEKTLEHVHEYADAGLRTLILAYRELNEEEYKEFDNKISEAKNSVRADQETLVEEVSDKIERDLILLGATAVEDKLQNGVPGCIDKLAQAGIKIWVLTGDKMETAINVGYACSLLRQGMKQIIIHLETPEIHAVEKVGDKRAITKASRECVQNQISEGMQQVITSRGSSQQAFALIVDGKSLAYALDDNMKNMFLDLAVCCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTVFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPMLYQEGVQNILFSWRRILSWMLNGFISAIIIFFFCTKAMEIQAFNDQGKTTGRDILGATMYTCVVWVVNLQMGLAISYFTLIQHIFLWGSVALWYLFLFVYGSITPSFSTNAYKVFIEALAPAPSYWIVTFFVVISTLIPYFTFSAIQMQFFPMHHEMVQWIRYEGKTDDPELCEMLQQRSLRLNTVGSTARIAANANHVRDRDCGL 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0644 1199 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 501 704 IPR023299 GO:0000166
Lal22g0644 1199 SUPERFAMILY HAD-like 414 911 IPR036412 -
Lal22g0644 1199 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Lal22g0644 1199 Gene3D - 702 907 IPR023214 -
Lal22g0644 1199 Pfam Phospholipid-translocating ATPase N-terminal 43 108 IPR032631 -
Lal22g0644 1199 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1195 - -
Lal22g0644 1199 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 834 949 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal22g0644 1199 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 4 1195 - -
Lal22g0644 1199 Pfam Cation transport ATPase (P-type) 534 628 - -
Lal22g0644 1199 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 1145 IPR032630 -
Lal22g0644 1199 SUPERFAMILY Calcium ATPase, transduction domain A 142 285 IPR008250 -
Lal22g0644 1199 Gene3D - 119 288 - -
Lal22g0644 1199 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1144 IPR023298 -
Lal22g0644 1199 Coils Coil 659 679 - -
Lal22g0644 1199 Gene3D - 519 701 IPR023299 GO:0000166
Lal22g0644 1199 SFLD p-type atpase 408 918 IPR044492 -
Lal22g0644 1199 CDD P-type_ATPase_APLT_Dnf-like 59 1016 - -
Lal22g0644 1199 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1152 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal22g0644 1199 SFLD C1.7: P-type atpase like 408 918 - -
Lal22g0644 1199 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Lal22g0644 1199 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Lal22g0644 1199 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0644 Lal-Chr22 4577324 4585432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0644 1 1193 Primary Pumps ATPases AT1G68710 73.757 0.0 1905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0644 22 4577324 4585432 Lal22g0644 22 4577324 4585432 ECH
Lal22g0644 22 4577324 4585432 Lal6g0721 6 4812276 4819490 LSH