Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0643 ATGTACAACACATATTTCAGCTCAACGATATATGCGTTTAGGTGTAAAGAGTCATGCACTTTATCTTCCAATGGCTACTCAAATTTATGGTATGAAAGATTTGAAAGAACCCCATCATGTTGTTCATCACGTTGTGGTTTTTGTGATTTCTGTTCACTCTCCACTTACAGAGTGCCCGTAAAGTCCAGTCTTCTGAGTGGGCTGAGGCAATCTACTCTCATTCAATTGCCAGCTTCTAGAAGGATGATTTTGGGGGGTGGAGATCTGTACTTTTCCCGGCTACCATCTTTTGAGCTCCATAGGAATTGTTATGAGATTAATTGTTCTGTCAATGAGAGAACTGTTTGCAATACAAGTAGAAGGATAATAAAGGGAAGACACTTGGCTGCAGTTTCTCGGAAAGGAAGGGAAGTTTGTCATTCATTTGATTCTGATGATGTTGAATCAATTCTCAGCTTATTGAGTGAGGAAGCAGATAAGGATGTTTGTGATATCAAATTGAAGAATGTGTCTTCATCCAAAAGAGTGGAAGCTGAAAAGAAAGGAAAAAATGTAAGTAAACAAAGAAAGTTGAGTTTGGTTAAGAAAGTAGAAACAGAGAAAAAAGGAATTTTGAAGCAACATGAGGTAGCAACTACAGACTTGAGAAGAGAGGAAGAAAAACCTAACAAAGAAAAGGAAGCCTTTACTAAAAGTGAGAATCATAGGAAGCAAAGAGATGTTTCTAGTTGTTCATCTTTTTACTCACTTTCATCAGGGGGTTTTGTGAGTGACCTGGAAGTTCAAGATAAGCATGACTTGGAAGAATTATCGGTAGGATATGAGAAGGATGCTGTAAAACACGTGGAGGTAAAAGGGACGGGTGAACTCAACAGGAAAAGAGATGACTCAAAGAAGCTGCATGGTGTTTCAAATCAGGAAAGAACTGCCTTTGGTGCTGATATTAATTGGAACCTAAGGAAGAAGTCTGAAAAGAAGTTGACTGATGTAACTATGCAAGAAACAGAATCCACAAAAGAACACCAAGATAAGCATTCAAAAGCATTTAGAACTCATGAACCTAGTCATGGAAAAGCATCTATTTCACACAAGCAAGTCAGAAGTGAGGAAGATGATTCATCTTTTGTCAAGGATTTGGATAGGAGAATGGAAAAGGCATTTATTAAAGCAGGAAAGATAAGAAGGCATCGATCTACAGATACACAAGAGTCTGGTCATGAAGTTGAATTAACTTTGTCAGCACAGAAGACACAAAGTGGCAGGGAAGGAAACCTTGAGATATCAGAAACATTGTTACAGGAAAGAAGCGACGAACATAAAAAGTTTGTTGGATCTAATTCTACCACGGAAAGTGAAACTTTGAAATCAAAGAAGGCATTCAGTGGCAGGGAAGAGAGCCTTGGGATACCAGAAACACTTCTACGTGAAACGCATGATGAACATAGAAAATTTGGTGGTTCTACTCCTACCACCGGAAAGGATGTAATAAATAGAAATCCCAAGAAATTTATGGGAGAATCAAAAGTTGAAGACACTGTAAGGACCTTAAATACTAGAATGAAGAATCCCGGAGAGAAAAAAAAATCAGTTTTGAGTTATGTTCAAGGAATAGAGGAGCAAAAACACCAAAAAGGAGAAAAGACCATTACACAGGCTAAAGAGAGAAGAAAGTTTCAACAATTTTCTGAAGTATCACAAGTTCATGAGAGTAAGGTTGAAGATACATCCACTGTGAAGTCCAGAACTAGAATAAATGACTGGGAATATAATTCAAACTTAAGCACAGATACAAGGGGTACATGGCGCCAAACAGATAAAATGACAAATCAGAGTATTCAACACGGAAAAGGGTCTGAACATGTCATCCCTTTATCAGAAGGCTATGCCAGTGATGAAAAGCAAGTTTCCACTTCTCAAGGAAATTTTGGGAAGGTGAGGTACATCCCAAAAAGTAAACCGATGGCAGTTGATAAAACTAGAGAGAGTTCTCACCAGACTGATGAAAGGATTGCAAATTTTTACTTGCACAATGAGGATGAAAGACCAAAGAACCTATCAATTTCTGATGAAACTGCCTCAAGAAAGGAAGCCACATTCCATGGATCACTGGATTTGGTTTCTGAGGCTGGAAAACATGTTATATTTGCAGAAGGTGGTGAACAAAGTTCTCCATTAATGTCGTTTCGTTCCTCATTCGGATTGATGGGTAGAGACACAAAACACATTGAACTCACTGCTGGAATTGCAAGCCCCAGGATCATTGTTGAAAGTTCAGACAGTGGCTCGTCTACTTTGTATGACAATTCAGAAAGAAGTTCTGTTTTGCTTTCTGGATCGTATTCTACAGATGGAACTGATCAAGCCTATAGCAAGCCTTCTAACATCATATCTCTGGAAGGTGCTACTAGTTCAGCTGATCGATTACAGAAATCATCCAAACAGTTTGTTGGTGAGCATGTTGAGAGGATCAGGCATGAAGAGACCACTTCAGAAACAGAAGAGATGGAAGTTACTGGAACAAAGTTGGCCATAGAAGATGAGGGAAATCAGATCGACCATTCAAGGCGACAAGGCCCTCAAAATGGCTCACAGTCGAAGGAGCATGGATCTAGCCATTCCGCTGGGGTTCATGGGACCAAAGGACCTTCTGATGAGATCTGGGATGCAAACGAACCATCTATTGAGAACAATCTTGTAGCTGGAGAGCCAAAGATCAGCAAGGATACTGAAAAAACAATTGTCAGAAGAACTGCCAGGTCCCCGTGGAGTATGTTTGGAGATCTTGTTCGTTTAGGATGGGGTTCACCTGCTGGTTCCTCTACTTCAGCTGGAAGATCTAGTGAGAGAAAATTGTCAAACAAGTCTGGTAGTGAGACATGGTTTTCGGGGCAGGAGCATGAGGAAACCAGTAAAAGTAATGTGATAAAGGAAACAAGTGTACTACCACAAATCACCACTTCTGATAGGTCAAAACCGAGTACACCTTATACCCAAAGTGAGGGAGAGGTGTCTGACACTAAAAAAATGAAGGACAAAGGCAAACATCTTGAAGCTGGATCATCTTCTCCGAGTACATTGGAAAGTGGATCAACATTAGTAGGTGCCTCATATGCTTCCGGAGAGGCAAATGCCAATTGGAGTGATGATGGGAAAGATTTGAAAGTCACTACTTCAGGCATAAAAAATGTGGAATTACCAATTCTGTTACCTGCCAGAGGGCCTCCTGTTGTTGGAGAAATTGTAAATATTGGTGGGTCTGACATGTCTGGAACTGAGTCAATAGTTCCAATCAAGGAACCTGTTGCTCCAGTGCAATCTGTATCATCTGGCTCTGGGAAAAAGAATGGAGAGTTGATGCAACAGAAGTTTCAACAGAGCAATCAAGTCTTAAGAGATAGGTTTGATGACTGGGAAGAAGCCTATCAACTTGAATTTGAGCAGCGGAGAATGGATGAAATTTTCATGAAGGAAGCACTTTTGGAAGCTAAGAAAGCTGCTGATACTTGGGAGGTCCCTGTTGGTGCAGTTCTTGTGCAGGATGGGAAAATTGTTGCACGGGGGTGCAACTTAGTAGAAGAATTGCGGGATGCCACTGCTCATGCAGAGATGATTTGTATCCGAGAAGCTTCAAACCTTCTTCGGACGTGGAGACTATCAGATAGCACACTTTATGTCACGCTTGAGCCCTGTCCTATGTGTGCTGGAGCCATTCTTCAGTCAAGAATAGATACTGTTGTGTGGGGAGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGGCTTTTCCCTGATGGAGGAGAAAGTTCATCTGAACCAAGAGATATACCACCTGTCCCAGTTCATCCATTCCATCCAAAGATAAAGATAAGACGAGGAGTCTTGGCCGCGGAGTGTGCCGACATAATGCAGCAATTCTTTCAGCTGAGAAGGAGAAAGAAAAAAGAAGAATCATCAAATGACCCCTCTTCTCTTGCTGTTACTCACCACCCTTCCAAGTTTGTTGACAAGATTCATGACATCTTTCATGTAATGTTCTGTTTGTAA 4050 0.4086 MYNTYFSSTIYAFRCKESCTLSSNGYSNLWYERFERTPSCCSSRCGFCDFCSLSTYRVPVKSSLLSGLRQSTLIQLPASRRMILGGGDLYFSRLPSFELHRNCYEINCSVNERTVCNTSRRIIKGRHLAAVSRKGREVCHSFDSDDVESILSLLSEEADKDVCDIKLKNVSSSKRVEAEKKGKNVSKQRKLSLVKKVETEKKGILKQHEVATTDLRREEEKPNKEKEAFTKSENHRKQRDVSSCSSFYSLSSGGFVSDLEVQDKHDLEELSVGYEKDAVKHVEVKGTGELNRKRDDSKKLHGVSNQERTAFGADINWNLRKKSEKKLTDVTMQETESTKEHQDKHSKAFRTHEPSHGKASISHKQVRSEEDDSSFVKDLDRRMEKAFIKAGKIRRHRSTDTQESGHEVELTLSAQKTQSGREGNLEISETLLQERSDEHKKFVGSNSTTESETLKSKKAFSGREESLGIPETLLRETHDEHRKFGGSTPTTGKDVINRNPKKFMGESKVEDTVRTLNTRMKNPGEKKKSVLSYVQGIEEQKHQKGEKTITQAKERRKFQQFSEVSQVHESKVEDTSTVKSRTRINDWEYNSNLSTDTRGTWRQTDKMTNQSIQHGKGSEHVIPLSEGYASDEKQVSTSQGNFGKVRYIPKSKPMAVDKTRESSHQTDERIANFYLHNEDERPKNLSISDETASRKEATFHGSLDLVSEAGKHVIFAEGGEQSSPLMSFRSSFGLMGRDTKHIELTAGIASPRIIVESSDSGSSTLYDNSERSSVLLSGSYSTDGTDQAYSKPSNIISLEGATSSADRLQKSSKQFVGEHVERIRHEETTSETEEMEVTGTKLAIEDEGNQIDHSRRQGPQNGSQSKEHGSSHSAGVHGTKGPSDEIWDANEPSIENNLVAGEPKISKDTEKTIVRRTARSPWSMFGDLVRLGWGSPAGSSTSAGRSSERKLSNKSGSETWFSGQEHEETSKSNVIKETSVLPQITTSDRSKPSTPYTQSEGEVSDTKKMKDKGKHLEAGSSSPSTLESGSTLVGASYASGEANANWSDDGKDLKVTTSGIKNVELPILLPARGPPVVGEIVNIGGSDMSGTESIVPIKEPVAPVQSVSSGSGKKNGELMQQKFQQSNQVLRDRFDDWEEAYQLEFEQRRMDEIFMKEALLEAKKAADTWEVPVGAVLVQDGKIVARGCNLVEELRDATAHAEMICIREASNLLRTWRLSDSTLYVTLEPCPMCAGAILQSRIDTVVWGAPNKLLGADGSWIRLFPDGGESSSEPRDIPPVPVHPFHPKIKIRRGVLAAECADIMQQFFQLRRRKKKEESSNDPSSLAVTHHPSKFVDKIHDIFHVMFCL 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0643 1349 MobiDBLite consensus disorder prediction 801 889 - -
Lal22g0643 1349 SUPERFAMILY Cytidine deaminase-like 1141 1316 IPR016193 GO:0003824
Lal22g0643 1349 MobiDBLite consensus disorder prediction 209 240 - -
Lal22g0643 1349 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 897 1339 - -
Lal22g0643 1349 Hamap tRNA-specific adenosine deaminase [tadA]. 1155 1312 IPR028883 GO:0002100|GO:0008251
Lal22g0643 1349 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1149 1271 IPR002125 -
Lal22g0643 1349 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 897 1339 - -
Lal22g0643 1349 MobiDBLite consensus disorder prediction 437 465 - -
Lal22g0643 1349 MobiDBLite consensus disorder prediction 854 872 - -
Lal22g0643 1349 MobiDBLite consensus disorder prediction 812 853 - -
Lal22g0643 1349 MobiDBLite consensus disorder prediction 1003 1017 - -
Lal22g0643 1349 Gene3D Cytidine Deaminase, domain 2 1139 1325 - -
Lal22g0643 1349 MobiDBLite consensus disorder prediction 935 1030 - -
Lal22g0643 1349 MobiDBLite consensus disorder prediction 209 241 - -
Lal22g0643 1349 Pfam MafB19-like deaminase 1151 1251 IPR028883 GO:0002100|GO:0008251
Lal22g0643 1349 MobiDBLite consensus disorder prediction 326 375 - -
Lal22g0643 1349 CDD nucleoside_deaminase 1155 1262 - -
Lal22g0643 1349 MobiDBLite consensus disorder prediction 480 499 - -
Lal22g0643 1349 MobiDBLite consensus disorder prediction 935 1002 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0643 Lal-Chr22 4554323 4560742 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0643 22 4554323 4560742 Lal22g0643 22 4554323 4560742 ECH
Lal22g0643 22 4554323 4560742 Lal6g0720 6 4769831 4777351 LSH